Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02695 ATGCAAAGCATGTCTCTCTGTGCTTCACTCTCCTCCACAGCTTCACACCTCACTTCCCTTGCCTCCGTCTCTTCTTCCACCTCTCCACTTTCCCGCAAATTTTCTCTCACTTTCCGGGAAAAAAACAGAACCCCAATTGCACCACCTCACAAGCTCCCCTTCTTCTCAGCAAGGCCTGCCCCCACCAGAGTAGTGTTGGTGAAGTCTCAGGCCACAGCACCTGCTTCTTCTGAGGCTGTGAAGGTGACACCGGTGCCTTCTGAGATGAAGGCATGGGTGTATGGAGAATATGGGGGTGTGGATGTTCTGAAGCTGGACTCCAATGTTGCTGTGCCTGATGTGAAGGAGGATCAGGTGTTAATCAAAGTTGTTGCTGCTGCTCTTAACCCTGTTGATGCCAAGAGGAGGCAGGGAAAGTTTAAAGCCACTGATTCTCCTCTTCCGACTGTTCCGGGCTATGATGTTGCGGGTGTGGTGGTGAAAGTTGGTAGTCAAGTGAAGGACTTTAAAGTGGGTGATGAAGTGTATGGAGATGTAAATGAGAAAGCACTTGAAGGTCCTAAGCAGTTCGGATCTTTGGCTGAGTACACAGCTGTTGAGGAGAAATTGTTGGCACCAAAACCGAAGAATTTGGACTTTGCTCAAGCTGCTTCTCTTCCTCTAGCAATTGAGACTGCTTATGAGGGTTTGGAGAGGACTGGATTTTCTCCTGGTAAATCTATTCTTGTTCTAAATGGTTCTGGAGGAGTTGGAAGCCTAGTGATTCAGCTAGCTAAGCAAGTTTATGGAGCTTCAAGAGTTGCTGCCACTTCAAGCACTAGAAATTTGGACCTACTGAAAAGCTTGGGAGCTGATTTGGCCATTGACTACACAAAAGAGAACTTTGAAGATTTGCCCGAAAAATTTGATGTAGTTTATGATGCCATTGGGCAATGTGACAGGGCAGTGAAGGCTGTGAAAGAAGATGGCAGTGTGGTGGCACTCACAGGTGCTGTTACACCACCTGGCTTCAGATTTGTAGTTACTTCCAATGGAGAAGTTCTGAGGAAACTAAACCCTTACTTAGAAAGTGGGAAGGTGAAGCCAATTGTTGACCCCAAAGGTCCATTCCCCTTTGATAAGCTTGCTGAAGCCTTCTCTTACCTTGAAACAAACCGAGCAACTGGAAAGGTTGTTATACATCCCATCCCTTGA 1194 0.469 MQSMSLCASLSSTASHLTSLASVSSSTSPLSRKFSLTFREKNRTPIAPPHKLPFFSARPAPTRVVLVKSQATAPASSEAVKVTPVPSEMKAWVYGEYGGVDVLKLDSNVAVPDVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSQVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLAPKPKNLDFAQAASLPLAIETAYEGLERTGFSPGKSILVLNGSGGVGSLVIQLAKQVYGASRVAATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEDGSVVALTGAVTPPGFRFVVTSNGEVLRKLNPYLESGKVKPIVDPKGPFPFDKLAEAFSYLETNRATGKVVIHPIP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02695 397 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 44 397 - -
Gma08g02695 397 Gene3D - 230 344 - -
Gma08g02695 397 CDD MDR_like_2 89 393 - -
Gma08g02695 397 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 238 259 IPR002364 GO:0008270|GO:0016491
Gma08g02695 397 Gene3D - 96 393 - -
Gma08g02695 397 Pfam Alcohol dehydrogenase GroES-like domain 117 179 IPR013154 -
Gma08g02695 397 Pfam Zinc-binding dehydrogenase 282 393 - -
Gma08g02695 397 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 211 336 IPR036291 -
Gma08g02695 397 SUPERFAMILY GroES-like 86 243 IPR011032 -
Gma08g02695 397 SMART PKS_ER_names_mod 98 393 IPR020843 GO:0016491
Gma08g02695 397 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 44 397 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02695 Gma-Chr8 42218573 42222432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02695 117 340 Monolignol Biosynthesis Gene Families AT3G19450 23.735 5.52e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02695 K18980 - gmx:100810816 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02695 08 42218573 42222432 Gma08g02695 08 42218573 42222432 ECH