Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02693 ATGAGTACAAAACATACCGAAGAGGACAATGATTCTTCTTATCTAACTATACCTAACAAAGATAAAAGGAAACAAAAGAGTTCTCATGATAATGACAAGGAATCGGCTCCATCTCCAAAGCCTCCTGATTTAGATACTCAGGAGAGTGCTCCGTCCAACTCCCCACCGCCATCACCACCGCCACCACCGCCTCAGTTGAAACTGCCAATATTATCACCACCTCGGTTGAAACCTTCCTCAATATCATTGTTGTCACCACCATCTAAAGATTTAAGTGGATcaccatcatggtcaccgccacctccaccatcacggtcaccatcacctccatcatcCTTGTCATTGCTTTCATCGtcatcacccccaccatcaccttcatcacccccaccaccaccttcatcgcccccaccaccaccaccaccttcatcacccccaccaccaccttcatcgcccgcaccaccacaatcaGTGCCATTGCGCAATAACGGCAATCCTTCTCCTCCTCCTCCTTATTATCCACGTAAACAGTCACCGCCACAATTCCATGCTCCACCTCCTCCTTCTTCGCTTCCTCGTAATGCACCCTCCAATGATTCAACTCCGCGAACCTCTGACAAGCCACGATCAGGCCACCATGGCAAGCATGGTGGTGCTACTTCTTCCCATACAAACTCAACGGGTTCTTCTCCCAATCAAACCTCTTCTGATGATAATTCAGAAAAATATATTGGCTACACACTCATTGGGATTTTTGCTGTTGCCTTGGTTGCCCTAGCTGTATCTCTTGTTTTCGTGTTTAAGAAGAAAAAATCAAGAGGGGATGCCCATGTTACACCCTATATGCCACCCCTTAATATTCATGTAAAATCAGGTGTTAATGGGCATTACTATGTACAGCAGCCTATCCCATCACCTCCCCTTGCAAACAACTATGGAAATGGGAATGCGAGCATGCACCATTTAGGAGCTTCTTTCGACTCAGCTCAGTTCAAAAGTGCTCAGATAGTTTTTACCTATGAAATGGTTATGGAAATGACCAATGCCTTTTCTACTCAAAATGTTATTGGGGAAGGAGGGTTTGGGTGTGTTTACAAAGGTTGGCTGCCAGATGGAAAAGCAGTTGCAGTAAAGCAGCTTAAGGCCGGCGGTAGGCAGGGAGAAAGGGAATTCAAGGCTGAAGTGGAGATCATCAGCCGAGTTCATCATCGGCATTTGGTGTCATTAGTTGGTTATTGCATATGCGAGCAGCAAAGAATTCTTATCTATGAGTATGTTCCTAATGGAACACTCCATCATCACTTGCATGCAAGTGGAATGCCAGTATTGAATTGGGACAAGAGGCTAAAGATTGCAATAGGCGCTGCAAAGGGCCTGGCATATCTGCATGAGGACTGCTGCCAAAAGATTATTCACAGAGATATAAAGTCCGCAAACATACTTTTGGATAATGCTTATGAGGCACAGGTTGCTGACTTTGGACTTGCGAGGTTAGCCGATGCTTCCAATACCCATGTATCAACTAGGGTTATGGGGACCTTTGGGTACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGGGTTGTCCTCCTTGAGCTTGTAACTGGAAGGAAACCCGTTGATCAAACTCAGCCTTTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCAATTGAGACACGTGATTTTAGTGATCTAATAGATCCAAGACTCAAAAAACACTTTGTGGAGAATGAAATGCTCAGAATGGTTGAGGTGGCCGCCGCTTGTGTTCGCCACTCAGCTCCTAGACGGCCTCGTATGGTTCAGGTGGTAAGATCCTTGGATTGTGGAGACGAAAGTTCTGATCTATCTAATGGGGTGAAATATGGTCATAGCACGGTTTATGATTCTGGTCAATATGATAAAGAAATTATGCTATTCAGAAGGTTGGCCAATGGAACCTTTGTCGATTCTGATTTTGAGATATATAGTAGAGAATACAGTTTGTCAAGAGACACCTCAATGACCTCAAGAGGATCCCACCAAGAATTGATACGACATAGTTCTAGTGGGAGTTTGAATCTAGAGCTATCAACATGCATAGGACCAGTATTGAATGAAAACAGGGATTGA 2157 0.4043 MSTKHTEEDNDSSYLTIPNKDKRKQKSSHDNDKESAPSPKPPDLDTQESAPSNSPPPSPPPPPPQLKLPILSPPRLKPSSISLLSPPSKDLSGSPSWSPPPPPSRSPSPPSSLSLLSSSSPPPSPSSPPPPPSSPPPPPPPSSPPPPPSSPAPPQSVPLRNNGNPSPPPPYYPRKQSPPQFHAPPPPSSLPRNAPSNDSTPRTSDKPRSGHHGKHGGATSSHTNSTGSSPNQTSSDDNSEKYIGYTLIGIFAVALVALAVSLVFVFKKKKSRGDAHVTPYMPPLNIHVKSGVNGHYYVQQPIPSPPLANNYGNGNASMHHLGASFDSAQFKSAQIVFTYEMVMEMTNAFSTQNVIGEGGFGCVYKGWLPDGKAVAVKQLKAGGRQGEREFKAEVEIISRVHHRHLVSLVGYCICEQQRILIYEYVPNGTLHHHLHASGMPVLNWDKRLKIAIGAAKGLAYLHEDCCQKIIHRDIKSANILLDNAYEAQVADFGLARLADASNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDQTQPLGDESLVEWARPLLLRAIETRDFSDLIDPRLKKHFVENEMLRMVEVAAACVRHSAPRRPRMVQVVRSLDCGDESSDLSNGVKYGHSTVYDSGQYDKEIMLFRRLANGTFVDSDFEIYSREYSLSRDTSMTSRGSHQELIRHSSSGSLNLELSTCIGPVLNENRD 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02693 718 Pfam Protein tyrosine and serine/threonine kinase 351 622 IPR001245 GO:0004672|GO:0006468
Gma08g02693 718 PRINTS Proline rich extensin signature 30 42 - -
Gma08g02693 718 PRINTS Proline rich extensin signature 57 78 - -
Gma08g02693 718 PRINTS Proline rich extensin signature 99 116 - -
Gma08g02693 718 PRINTS Proline rich extensin signature 121 146 - -
Gma08g02693 718 MobiDBLite consensus disorder prediction 1 238 - -
Gma08g02693 718 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Gma08g02693 718 SUPERFAMILY Protein kinase-like (PK-like) 330 622 IPR011009 -
Gma08g02693 718 MobiDBLite consensus disorder prediction 52 71 - -
Gma08g02693 718 SMART serkin_6 349 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02693 718 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 85 692 - -
Gma08g02693 718 MobiDBLite consensus disorder prediction 78 92 - -
Gma08g02693 718 MobiDBLite consensus disorder prediction 121 192 - -
Gma08g02693 718 ProSiteProfiles Protein kinase domain profile. 349 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02693 718 MobiDBLite consensus disorder prediction 216 238 - -
Gma08g02693 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Gma08g02693 718 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 85 692 - -
Gma08g02693 718 Gene3D Phosphorylase Kinase; domain 1 312 424 - -
Gma08g02693 718 CDD STKc_IRAK 355 623 - -
Gma08g02693 718 Gene3D Transferase(Phosphotransferase) domain 1 425 639 - -
Gma08g02693 718 MobiDBLite consensus disorder prediction 1 39 - -
Gma08g02693 718 MobiDBLite consensus disorder prediction 93 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02693 Gma-Chr8 42154867 42160649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02693 244 691 Trihelix Transcription Factor Family AT5G38560 54.130 3.59e-170 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gma08g02693 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02693 - - gmx:100797563 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02693 08 42154867 42160649 Gma08g02693 08 42154867 42160649 ECH