Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02692 ATGAGTGGTTTGGGTGTTGTAGAGTGTCTTAGACCCCTTGTTAAGACCAATGCTTGGGATTATGTAGTTGTTTGGAAATATGGGGATGACCCAACAAGGTTTATTGAGTGGGTAGGTTGCTGTTGTAGAGGGAGTTGTAGTGTGAACATTGATGTGGTGAAGCCTGAAGAGGAAAAGGGTGAAGTGTGCAACTTGGCTCAAAGTTGCAGGGATGATCATTTTCATTTTCAGCATCTAGTTAGAACAAAGGCTTGTGAAGCTCTTGCTCAGCTTCCTTTTGCATTGTCTCTCTATTCTGGTGTGCATGGAGAGGTTGCCATATCACAACAAGCAAGATGGCTTACCCAGGATTCAATTGGAACCCAAGTTTTGATCCCTATTGTTGGTGGTCTTATTGAGCTCTTCACTGAAAACCTGATTCCAATGGATATGAATATCATAGAGTTCATAACAGCACATGGTTGTGTCTCTTTAGAGCAAGAAGCCATATCTGCACAGAGCTACACCAGTCTGAACATCAATGAACATCTGCCATTAAGGGAACAATACTCACATTGGTCACCACACATGCCAACTTTAACTCCTAGTGTCCATCAGCCTGCAACGAGACAGTGCAGCTCCCATCCTAGCATTGAAGGACCATCCAGTGGGTCTAATCCTTCAACTGAAGAACCATCATTTGATTCAAAGTTTGCTTCCTTGATTCCACATGAATATCTGAAACCACCAGTTAAAAAATCTCCCATCCCCAAAACTGAAACGCCTAAGTACAACAAAACTTCAGGGAAATGGCAGAGAGGTTTAAGTTCCCATTGTAGCAATGAGGAAGACGATGAATCAAAATCAGTCAAGGAGTCTCAGAAGGAAGTTTACCAGGCTAAGAATCTTGTCACAGAGAGGAATAGGAGGAACAAGATAAAAAAAGGGCTTTTTACACTGCGGTCTCTAGTCCCAAGGATAACCAAGATGGATAGAGCTGCAATTCTTGCCGACGCGGTTGACCATATAAAGGAATTGCAAACACAAGTAAGAGAACTTAAAGATGAGGTCAGGGATTTGGAAGAACAGGAATGTGAGAAGAACACGCCACAATTGATGATAACAAAAGGCAAAAAACCAGAAGGAACCAGAAGTAACCCTCCTCTTAATCAAAGTTCTTCTGGTTGCACTAAAAAGATGCAAATGGAGGTGCAAGTAGAAGTGCATCACATTAGCAAGACAGATTTCTTAATTAAGTTATGCAGTGAGCAGACGCAAGGTGGGTTCTCAAAGTTGATGGAAGCTATACATTCAATTGGACTAAAGGTGGATAGTGCCAATATGACCACACTTGATGGCAAAGTCCTTAACATTCTGACGGCTAAGGCAAACAAACAGGATATTCACCCAACTAAACTTAAAGAGTATTTAATACAGAAGACAAGCGATGATAGGCAAAGTAGCAAACAAGTTCGAGAAAATGGTGGTGATATGAAGAGTTCAAGAAAGTAA 1491 0.4152 MSGLGVVECLRPLVKTNAWDYVVVWKYGDDPTRFIEWVGCCCRGSCSVNIDVVKPEEEKGEVCNLAQSCRDDHFHFQHLVRTKACEALAQLPFALSLYSGVHGEVAISQQARWLTQDSIGTQVLIPIVGGLIELFTENLIPMDMNIIEFITAHGCVSLEQEAISAQSYTSLNINEHLPLREQYSHWSPHMPTLTPSVHQPATRQCSSHPSIEGPSSGSNPSTEEPSFDSKFASLIPHEYLKPPVKKSPIPKTETPKYNKTSGKWQRGLSSHCSNEEDDESKSVKESQKEVYQAKNLVTERNRRNKIKKGLFTLRSLVPRITKMDRAAILADAVDHIKELQTQVRELKDEVRDLEEQECEKNTPQLMITKGKKPEGTRSNPPLNQSSSGCTKKMQMEVQVEVHHISKTDFLIKLCSEQTQGGFSKLMEAIHSIGLKVDSANMTTLDGKVLNILTAKANKQDIHPTKLKEYLIQKTSDDRQSSKQVRENGGDMKSSRK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02692 496 MobiDBLite consensus disorder prediction 253 269 - -
Gma08g02692 496 MobiDBLite consensus disorder prediction 188 228 - -
Gma08g02692 496 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 65 475 - -
Gma08g02692 496 Pfam Helix-loop-helix DNA-binding domain 297 340 IPR011598 GO:0046983
Gma08g02692 496 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 151 IPR025610 -
Gma08g02692 496 MobiDBLite consensus disorder prediction 368 388 - -
Gma08g02692 496 Gene3D - 279 357 IPR036638 GO:0046983
Gma08g02692 496 MobiDBLite consensus disorder prediction 241 288 - -
Gma08g02692 496 MobiDBLite consensus disorder prediction 270 288 - -
Gma08g02692 496 MobiDBLite consensus disorder prediction 471 496 - -
Gma08g02692 496 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 290 339 IPR011598 GO:0046983
Gma08g02692 496 PANTHER TRANSCRIPTION FACTOR BHLH90 65 475 - -
Gma08g02692 496 Coils Coil 329 359 - -
Gma08g02692 496 SMART finulus 296 345 IPR011598 GO:0046983
Gma08g02692 496 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 294 356 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02692 Gma-Chr8 42150975 42154114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02692 6 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 31.809 1.17e-65 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma08g02692 bHLH-MYC_N 1e-15 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02692 - - gmx:100807261 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02692 08 42150975 42154114 Gma08g02692 08 42150975 42154114 ECH