Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02679 ATGTCAACACTGAACCACCTCTTTGATCTTCCAGAACAGATATGCTACGTACAATGTGGATTCTGTACAACAATACTAATGGTGAGTGTTCCATGCAGCATTTTGTCAACGGTGGTGACAGTGAGATGCGGCCACTGCACAAGCCTCCTCTCAGTCAACATGAAGAAAGCTTCCTTTGTCCCTTTCCACCTTCTTGCTTCCCTTACTCATCTTGAGCCAAAAGAAGGTGCTTCAGATGATGGTGCAAACAAGAGTTTGAACAGCTATAATAATGCATCCATAATAACCACCAATTCGGACTGTGAGGAAGAGAACGTGACTCAAATTTCCAATGTCGTGCATAAACCTCCAGAGAAGAGACAGAGAACACCATCTGCATATAACCGCTTCATCAAAGAAGAGATTAAAAGGCTTAAGTCTGAAAACCCTAACATGGCCCACAAGGAGGCTTTCAGTACTGCGGCAAAAAATTGGGCCAATTTTCCCCCATCACAGTGTGATGGAGAAGCCGACAGCTGTAACGGGACAGAGCAACTTGGGGATCTGGACTCCCATGAAGAGCCTCGTGATGCTATTGAGGTTCATAAAGAAGGCCAAGGTTTCCGTGGAAGAAAGGCTCCAAGGAATTCTATCTGGGAAAGGGCACCTTTTGAATGA 657 0.4521 MSTLNHLFDLPEQICYVQCGFCTTILMVSVPCSILSTVVTVRCGHCTSLLSVNMKKASFVPFHLLASLTHLEPKEGASDDGANKSLNSYNNASIITTNSDCEEENVTQISNVVHKPPEKRQRTPSAYNRFIKEEIKRLKSENPNMAHKEAFSTAAKNWANFPPSQCDGEADSCNGTEQLGDLDSHEEPRDAIEVHKEGQGFRGRKAPRNSIWERAPFE 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02679 218 MobiDBLite consensus disorder prediction 167 218 - -
Gma08g02679 218 Pfam YABBY protein 11 164 IPR006780 GO:0007275
Gma08g02679 218 Gene3D High mobility group box domain 112 216 IPR036910 -
Gma08g02679 218 MobiDBLite consensus disorder prediction 180 211 - -
Gma08g02679 218 PANTHER AXIAL REGULATOR YABBY 4 1 178 - -
Gma08g02679 218 PANTHER PROTEIN YABBY 6-RELATED 1 178 IPR006780 GO:0007275
Gma08g02679 218 SUPERFAMILY HMG-box 110 165 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02679 Gma-Chr8 41941937 41945002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02679 2 218 C2C2-YABBY Transcription Factor Family AT1G23420 57.709 3.48e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Gma08g02679 YABBY 6.7e-62 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02679 K25796 - gmx:100803001 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02679 08 41941937 41945002 Gma08g02679 08 41941937 41945002 ECH