Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02669 ATGGCTGCTACCTCAGTCTCCTACTTCAGGTACGATGACTACAACTTCTTCGGCGAAACTCGAAGCGACCAAGACACCACCGTGTGTGGAAATAATAGTAGTAACAACAATTCTAACAGTGCTGCAAATAGTGCTACTAACAGTAGTAGCGGTGTTTATAAGGCAAATGCTATGGCCTTGGTTCGGAACCTGAGTGGGTTGGCGCCGAAGAACGATGGTTTTTTCGTTGGGTCGGTGGAGAGAAAGAACGTGAGTGTCTATGGATTGGCTCAGTGCTGGGAGTTTGTGAATGGCAGTGCTTGTGAGAGATGTTTAGCGGATGCTGTCACGAGGATTGGTTCGTGTTCGACGCAAGAAGCGAGGGCGTTGAGTGCTGGTTGTTACTTGAGGTACTCTTCTCAGAAGTTTTATAACAATTCTAGCGATGTTGTAACCGCTGGAAAACATGGAAAACGTACTCTAGTTAAAATTCTGGCTGCGTCTTCTGCTGCCCTGGCTCTTCTGCTAGTTGTTGTGACAGTTGTTTTCTTTACAAGGAAGAATGTGGTGACAAGGAGAAGAGAAAGAAGACAGTTTGGCGCTCTTCTAGCCACAGTGAATAAGTCCAAGCTAAATATGCCTTACGAGGTTCTTGAAAAAGCAACAAATTACTTCAATGAGGCCAACAAGCTTGGACAAGGGGGATCAGGTTCTGTTTATAAAGGAGTTATGCCAGATGGAAATACTGTTGCCATAAAAAGGCTTAGCTATAACACAACACAATGGGCAGAGCATTTCTTCACTGAGGTCAATTTGATCAGTGGCATTCATCACAAAAATCTAGTGAAACTTTTAGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCTAACCAGAGCCTCCATGATCACTTTTCTGTTAGAAGGACTTCTCAACCGCTGACTTGGGAAATGAGGCAGAAAATTATATTAGGAATTGCAGAGGGCATGGCCTACCTTCATGAGGAATCTCATGTGAGAATCATTCATAGAGACATAAAATTAAGCAACATTCTGCTTGAGGAGGACTTCACACCCAAGATTGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGACAAGTCTCACATTAGCACAGCCATTGCTGGCACACTGGGGTATATGGCTCCGGAGTATATTGTTCGTGGGAAGTTGACTGAGAAAGCAGATGTTTACAGTTTTGGAGTTCTTGTTATTGAAATAGTTTCTGGCAAGAAAATCAGTTCCTATATTATGAATTCATCCTCTCTCCTACAAACGGTTTGGAGCCTCTATGGATCAAATAGGCTATATGAAGTCGTTGATCCGACCCTAGAGGGTGCTTTTCCTGCAGAGGAAGCATGCCAACTGCTTCAGATAGGGTTGCTTTGTGCACAAGCATCTGCAGAGTTGAGACCATCAATGTCAGTAGTAGTTAAAATGGTTAATAACAATCACGAAATTCCTCAGCCAGCACAACCGCCTTTCATCAATTCCAGTAGTTCAGAATTCAGCAAATCTGGTTTACCTGGATATAATTTTCAGCCTGGATCCAACACTCAGTCTTCAGGGAACACCATAAGTGAAAGTCAGATTGAGCCTAGATAA 1620 0.4315 MAATSVSYFRYDDYNFFGETRSDQDTTVCGNNSSNNNSNSAANSATNSSSGVYKANAMALVRNLSGLAPKNDGFFVGSVERKNVSVYGLAQCWEFVNGSACERCLADAVTRIGSCSTQEARALSAGCYLRYSSQKFYNNSSDVVTAGKHGKRTLVKILAASSAALALLLVVVTVVFFTRKNVVTRRRERRQFGALLATVNKSKLNMPYEVLEKATNYFNEANKLGQGGSGSVYKGVMPDGNTVAIKRLSYNTTQWAEHFFTEVNLISGIHHKNLVKLLGCSITGPESLLVYEYVPNQSLHDHFSVRRTSQPLTWEMRQKIILGIAEGMAYLHEESHVRIIHRDIKLSNILLEEDFTPKIADFGLARLFPEDKSHISTAIAGTLGYMAPEYIVRGKLTEKADVYSFGVLVIEIVSGKKISSYIMNSSSLLQTVWSLYGSNRLYEVVDPTLEGAFPAEEACQLLQIGLLCAQASAELRPSMSVVVKMVNNNHEIPQPAQPPFINSSSSEFSKSGLPGYNFQPGSNTQSSGNTISESQIEPR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02669 539 Gene3D Phosphorylase Kinase; domain 1 178 293 - -
Gma08g02669 539 Gene3D - 32 136 IPR038408 -
Gma08g02669 539 SUPERFAMILY Protein kinase-like (PK-like) 205 510 IPR011009 -
Gma08g02669 539 ProSitePatterns Protein kinases ATP-binding region signature. 224 246 IPR017441 GO:0005524
Gma08g02669 539 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 526 - -
Gma08g02669 539 Pfam Salt stress response/antifungal 45 133 IPR002902 -
Gma08g02669 539 ProSiteProfiles Protein kinase domain profile. 218 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02669 539 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 7 526 - -
Gma08g02669 539 CDD STKc_IRAK 224 488 - -
Gma08g02669 539 Pfam Protein kinase domain 219 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02669 539 SMART serkin_6 218 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02669 539 ProSiteProfiles Gnk2-homologous domain profile. 35 136 IPR002902 -
Gma08g02669 539 Gene3D Transferase(Phosphotransferase) domain 1 294 497 - -
Gma08g02669 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Gma08g02669 539 MobiDBLite consensus disorder prediction 494 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02669 Gma-Chr8 41678320 41682939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02669 8 383 Receptor kinase-like Gene Family AT1G70530 60.743 1.07e-162 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma08g02669 Pkinase 7.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02669 - - gmx:100305402 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02669 08 41678320 41682939 Gma08g02669 08 41678320 41682939 ECH
Gma08g02669 08 41678320 41682939 Gma17g00826 17 6980631 6984999 ECH