Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02662 ATGTATTCCACTTCCCTCCTTCACCAGGGGAGTTTCTACTTCACAACTATGATTTCATTCACTAATCTTCTTTCTCTTCTTTTCCCTTTGTTCACAACTTCTTTTGTTAGAGTTTTTGCCTCTGAGGTCTCAATCAAAACAACAAATTTGTCACCTTTAAATTGCTCTTCCAAAATCAGAACATGTAATGCCTCACTCTACCACATATCCCAAAATCTCACAATTGAACAAATAGCCTCCTTTTACTCAGTTATTTCTTCCCAAATCACACCTATAATGCATGGCATCAAACAAGACTACCTCATCAGGGTACCTTGTTCATGCAAAAACACAAGTGGCCTTAGCGGATACTTTTATGACACAACCTACAAAGTGAGGCCAAATGACACTTTTGCAAATATTTCAAACCTGATTTTCAGTGGCCAAGCTTGGCCGGTTAATCATACATTGCAACCAAATGAGACTTTAGCAATACACATTCCATGTGGATGTTCAGAAAGTAAGTCTCAAGTAGTTGTTACCTACACGGTCCAGCCGAACGATACACCGATGATGATTGCTAATCTGCTAAATTCTACACTGGCTGACATGCAGAACATGAACAAGGTTCTGGCTCCGAACATCGAATTCATCGATGTTGGTTGGGTGCTATTTGTCCCTAAGGAATCCAAAGGGCTACTACTACTACCTAGTGCTACTAAAAAGAAACATAATAAGTGGACAACAATAATCATTGGCATCTTAGGGGGCATGACATTGCTTTCAATTGTTACAACGATCATTCTCATTCTCAGGAGAAATAAAGTCGACAAAATCAGCATAGAAGATTCACGCCTTATTTCTGGAAGATCAATTGCCAATAAAACTATTTCCTCAAAGTATAGTCTTCATAAGGAATTTGTGGAAGATTTAATTTCATTTGAATCAGAAAGACCATTGATATATAACCTTGAGGACATTGAAGAGGCTACAAATAACTTTGATGAAAGTCGTAAAATAGGAAGTGGTGGATATGGAAGTGTTTATTTTGGAATCTTAGGGAACAAGGAGGTTGCTGTGAAGAAGATGAGGTCTAATAAATCTAAAGAGTTCTATGCTGAACTCAAGGTCTTGTGTAAAATCCACCATATCAACATTGTGGAGCTGTTGGGATATGCCAACGGAGAAGATTATCTCTATTTAGTGTATGAGTATGTTCCAAATGGATCTCTCAGTGATCATCTTCATAATCCATTACTGAAAGGGAACCAGCCTCTTTCTTGGAGTGCTAGGGTTCAAATTGCACTGGATGCTGCAAAAGGTCTTGAATATATACATGATTATACAAAAGCACGATATGTGCACCGTGATATAAAGACTAGCAATATTCTACTTGATAACAAGTTCAGAGCAAAGGTGGGAGATTTTGGACTTGCAAAGCTGGTAGATAGAACAGATGATGAAAATTTTATAGCAACTAGGCTTGTAGGAACACCAGGCTACCTTCCACCAGAATCTCTGAAGGAGCTTCAAGTGACCCCGAAAACCGATGTGTTTGCATTTGGAGTGGTGCTTTCAGAGCTGTTAACAGGAAAACGTGCACTTTTTCGAGAAAGCCACGAAGACATCAAAATGAAATCACTTATTACTGTTGTTAATGAAATATTCCAAGATGATGACCCAGAGACTGCTTTAGAAGATGCCATAGATAAGAATCTTGAAGCTAGCTATCCGATGGAAGATGTCTACAAGATGACAGAAATAGCTGAGTGGTGCTTGCAAGAAGATCCAATGGAAAGGCCTGAAATGAGGGATATCATTGGGGCATTGTCACAGATTGTGATGTCCTCGACAGAGTGGGAAGCATCCCTATGTGGAAACAGCCAGGTCTTTAGTGGGTTATTTAGTGGAAGATGA 1896 0.3914 MYSTSLLHQGSFYFTTMISFTNLLSLLFPLFTTSFVRVFASEVSIKTTNLSPLNCSSKIRTCNASLYHISQNLTIEQIASFYSVISSQITPIMHGIKQDYLIRVPCSCKNTSGLSGYFYDTTYKVRPNDTFANISNLIFSGQAWPVNHTLQPNETLAIHIPCGCSESKSQVVVTYTVQPNDTPMMIANLLNSTLADMQNMNKVLAPNIEFIDVGWVLFVPKESKGLLLLPSATKKKHNKWTTIIIGILGGMTLLSIVTTIILILRRNKVDKISIEDSRLISGRSIANKTISSKYSLHKEFVEDLISFESERPLIYNLEDIEEATNNFDESRKIGSGGYGSVYFGILGNKEVAVKKMRSNKSKEFYAELKVLCKIHHINIVELLGYANGEDYLYLVYEYVPNGSLSDHLHNPLLKGNQPLSWSARVQIALDAAKGLEYIHDYTKARYVHRDIKTSNILLDNKFRAKVGDFGLAKLVDRTDDENFIATRLVGTPGYLPPESLKELQVTPKTDVFAFGVVLSELLTGKRALFRESHEDIKMKSLITVVNEIFQDDDPETALEDAIDKNLEASYPMEDVYKMTEIAEWCLQEDPMERPEMRDIIGALSQIVMSSTEWEASLCGNSQVFSGLFSGR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02662 631 ProSiteProfiles Protein kinase domain profile. 327 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02662 631 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 31 631 IPR044812 GO:0019199|GO:0045087
Gma08g02662 631 Pfam Protein kinase domain 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02662 631 SUPERFAMILY Protein kinase-like (PK-like) 310 603 IPR011009 -
Gma08g02662 631 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 31 631 - -
Gma08g02662 631 SUPERFAMILY LysM domain 173 220 IPR036779 -
Gma08g02662 631 Gene3D Phosphorylase Kinase; domain 1 306 398 - -
Gma08g02662 631 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Gma08g02662 631 Gene3D LysM domain 164 225 IPR036779 -
Gma08g02662 631 SMART serkin_6 327 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02662 631 Pfam LysM domain 175 220 IPR018392 -
Gma08g02662 631 Gene3D Transferase(Phosphotransferase) domain 1 399 621 - -
Gma08g02662 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02662 Gma-Chr8 41445331 41451236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02662 307 631 Receptor kinase-like Gene Family AT1G51940 51.662 3.25e-114 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma08g02662 Pkinase 1.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02662 - - gmx:100791718 1204.89