Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02653 ATGAAATTAGTACTTGCTGAGGAGTTAGGATTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAGATTGATGAAAGATGAAGCTGTTGCTAATGGGCGACAAGATCGTTCAAGTGGTGTCATCCAAGATCGTGGCAGTGGACTTGGGCAAGATTCATGCGGAAGCAGTAAGCATGCTGATCACAGGTATCTGGATCCTAAGGAGGTTGAGAGCCATGGCCTCTACAATCACGAATTGTCAGTTGCAGATATGACTCATGGATGTCTGGATCCATATGATATGGAGCCTTCTAGACATCTTACACCTAACGGAGCTCTTCCACCCCTAAATCCCAAAGGTGCAATTAACATGGGACACAAACCATCAGGATATTTGAAAGTGAAGGGCGAGATAGAACATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAGGCATTATCTGGAAGATGGTCCACTACTTGGTATAGAATTCGATCTGCTTCCTCCAGGGGCATTTGAATGCCAAACTGCAGATCCAGCTAATGGCAGTGAATGCTTAAAGATAGAACTGGGTGTGATAGGGGATGAATTGTTTATGGAACAGTAA 609 0.4302 MKLVLAEELGLTEKQISGWFCHRRLKDKRLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVESHGLYNHELSVADMTHGCLDPYDMEPSRHLTPNGALPPLNPKGAINMGHKPSGYLKVKGEIEHAAITAVKKQLGRHYLEDGPLLGIEFDLLPPGAFECQTADPANGSECLKIELGVIGDELFMEQ 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02653 202 Pfam Homeodomain 5 29 IPR001356 GO:0003677
Gma08g02653 202 MobiDBLite consensus disorder prediction 36 67 - -
Gma08g02653 202 Gene3D - 2 46 - -
Gma08g02653 202 ProSiteProfiles 'Homeobox' domain profile. 1 30 IPR001356 GO:0003677
Gma08g02653 202 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 97 184 - -
Gma08g02653 202 CDD homeodomain 5 29 IPR001356 GO:0003677
Gma08g02653 202 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 97 184 - -
Gma08g02653 202 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 93 - -
Gma08g02653 202 MobiDBLite consensus disorder prediction 42 60 - -
Gma08g02653 202 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 93 - -
Gma08g02653 202 SUPERFAMILY Homeodomain-like 2 38 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02653 Gma-Chr8 41316652 41317531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02653 1 177 Homeobox Transcription Factor Family AT4G03250 55.497 9.64e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma08g02653 Homeodomain 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02653 - - gmx:100803515 365.54