Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02649 ATGGTGAAGTTGGAAGAACTATGCGGCGCACACGTCACCCACCTCCGTTGCCAGTTACCAACCGAAGACCTCGACGCGTTGGTTTCCATCACGTGCGACGAGGACCTCAATAATCTCGTGGAAGAATACGACGGTGCCGTTTCATCTTTGAAAATCAGAGCCTTCCTTTGCTCTTCGCCTGCTCCGTCAAAATCTTCGTCGACAACGTCGTCGTCGTGCTCATCTTCTTCGTCGTCTCCGTCGTCTTGCTGCCGTACCGCTATGGCAGCGCCGCCGCAGTTGGCGAAGAAGTCTTATGTTTCTCTTTCCTCTCCCCGCTACTATAGTCATCCCCGCGTTCAGGGGAACCGTGGCGTCGTTTACCTCGTCCCCAGCGGCAACCACTGGCACTAG 393 0.5547 MVKLEELCGAHVTHLRCQLPTEDLDALVSITCDEDLNNLVEEYDGAVSSLKIRAFLCSSPAPSKSSSTTSSSCSSSSSSPSSCCRTAMAAPPQLAKKSYVSLSSPRYYSHPRVQGNRGVVYLVPSGNHWH 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02649 130 Pfam PB1 domain 3 55 IPR000270 GO:0005515
Gma08g02649 130 MobiDBLite consensus disorder prediction 59 93 - -
Gma08g02649 130 PANTHER OS05G0427100 PROTEIN-RELATED 1 123 - -
Gma08g02649 130 SUPERFAMILY CAD & PB1 domains 2 66 - -
Gma08g02649 130 MobiDBLite consensus disorder prediction 59 86 - -
Gma08g02649 130 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02649 Gma-Chr8 41201257 41201649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02649 4 58 MAP Kinase Kinase Kinase AT1G16270 51.724 5.67e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02649 - - gmx:100786933 224.172