Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02647 ATGGAAGAAGCACTCCGTCGTCTCAACGGAATGGGCCCCACTCAAGACCCCGACACAACCCTCTCCGACCACCACCCCAAGAAAAGCGCCACCACCAAGCGCGGGCTGCGCGATACCGCCAGCTCCGGCGGCACCATGCGCTATCGCGGCGTCCGACGCCGCCCCTGGGGCCGCTACGCTGCCGAGATCCGCGACCCGCAGTCGAAGGAACGGCGTTGGCTTGGCACCTTCGACACGGCGGAGGAGGCCGCCTTCGCATACGACTGCGCCGCCCGCGCCATGCGCGGCGCCAAGGCCCGCACCAACTTCGTATACCCCGACGCCGCCGACCCTCACCACCACCACCTCTTCCAACCCTACAACATCAACCCCAAACACTGCCATGTCACCAGGTTCGTCCCGAACCAAAATTTAAACGCTGACTTCTCCGCAAATTCCCACAACAACAACAATAACAACGTTTCTTCTTCTCTTAACATGGTTCTCTTTCGTGACTTTCTCAACTCTTCTTCTCACCACTTTCATAATAATAATAATAAGTCTTCTAGTTGTTATGTAAACTCTTCATCTTCTTCTGCTGCTGCAAATAACTGTCTCCAAGGTTGTTGCTTTACCAACCCTAATCTTGGAATGGAAGTTGCTGAAGCTATTGATGAAGAATCTGACTTTTTCCCAATAGAGTCTTCTGATTCTGGGTTGTTGGAGGAGATTGTCCACAAGTTCTTGCCAAAATCGAAGCCCAAGAAAGAAACTTTGTCTGTTCCTGAGTCACTTCCTCCTCAACAGAAATTTGAACTCAAGAATGTTTCTGCTGCAAGGGGTTGTGCTGATACTAGGACTAGGGTTCCGAAGGTTGAAGCTTTTGGTGCCCCTTATGATTCGTCTACCATGCAGCACCAATTTGAAGCCATTCATCATGGCTTCAACACCATGCAGGGCGTGTCTGTGGAGAGAAACAACCAGTTTTTGATGAACCATGTTGCTGCAGGATGCTCCAACCTGGAAGATTTTCTTCAGTATCCAGAGATTTTTAATTCCCTTGTAGCAAGGATGCAAAATGCTTAG 1065 0.508 MEEALRRLNGMGPTQDPDTTLSDHHPKKSATTKRGLRDTASSGGTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAAFAYDCAARAMRGAKARTNFVYPDAADPHHHHLFQPYNINPKHCHVTRFVPNQNLNADFSANSHNNNNNNVSSSLNMVLFRDFLNSSSHHFHNNNNKSSSCYVNSSSSSAAANNCLQGCCFTNPNLGMEVAEAIDEESDFFPIESSDSGLLEEIVHKFLPKSKPKKETLSVPESLPPQQKFELKNVSAARGCADTRTRVPKVEAFGAPYDSSTMQHQFEAIHHGFNTMQGVSVERNNQFLMNHVAAGCSNLEDFLQYPEIFNSLVARMQNA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02647 354 SUPERFAMILY DNA-binding domain 47 104 IPR016177 GO:0003677
Gma08g02647 354 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Gma08g02647 354 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 216 354 - -
Gma08g02647 354 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 208 - -
Gma08g02647 354 Gene3D AP2/ERF domain 46 105 IPR036955 GO:0003700|GO:0006355
Gma08g02647 354 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 216 354 - -
Gma08g02647 354 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 208 - -
Gma08g02647 354 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Gma08g02647 354 CDD AP2 47 103 IPR001471 GO:0003700|GO:0006355
Gma08g02647 354 MobiDBLite consensus disorder prediction 1 49 - -
Gma08g02647 354 MobiDBLite consensus disorder prediction 20 34 - -
Gma08g02647 354 Pfam AP2 domain 47 96 IPR001471 GO:0003700|GO:0006355
Gma08g02647 354 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Gma08g02647 354 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02647 Gma-Chr8 41178222 41179286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02647 1 255 AP2-EREBP Transcription Factor Family AT1G24590 39.362 2.62e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma08g02647 AP2 8.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02647 - - gmx:102665767 639.417