Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02641 ATGGAACTTCAGGAGAATCATGAGGAAGCTGAGCTTGGGCTGCCCACAGCAGTAGCAGCAACGAGCTATGAAGAGTTTGGAATGCCACCGAATCATGACGAACAAGAGCCAGTGGTGGAAGTGGTGCCAATGAACCACGTTGTCTCAATCGGTGGACACGCTATCGACGGCTGCATTGAGTTCCTACCGGGGGGTGAGGAGGGCACCCTGGACGCGCTAAAATGCGCTGCGTGCAACTGCCATCGAAACCTCCACCGTAAGGAGACCCACGACACCTACTCAGTGCCCTTCCGCCACCACCACCACCCACTGCTGCCACCCCCAGTGCCATTAGCAGCTTACTATCGTGCCCTGCCGGGGTACCTACACATGACGGGGCACCAATGTGCCATGCTAGCACACCCGTCCTTGTCGGGAAGAGGTGGGCCCCAGCCCCCCTGGGAAGACCTGGAGGACTCAGACCCTACGAGTGGTGCCACCACTCATGATGGGTCTGGGTCGAGCAGCAAAAAGCGCTTCAGGACCAAATTTACCCAGCATCAGAAAGACAAGATGTTGGTCTTCGCTGAGAAACTCGGGTGGAGGATGCAAAAGAACGATGAGAGCATCGTGCAAGAGTTTTGCTCCGAAATCGGTGTTCAACGTCATTTGCTAAAGGTGTGGATGCATAATAACAAGCACACCTTAGGTAAGAAGCCCTAG 702 0.5527 MELQENHEEAELGLPTAVAATSYEEFGMPPNHDEQEPVVEVVPMNHVVSIGGHAIDGCIEFLPGGEEGTLDALKCAACNCHRNLHRKETHDTYSVPFRHHHHPLLPPPVPLAAYYRALPGYLHMTGHQCAMLAHPSLSGRGGPQPPWEDLEDSDPTSGATTHDGSGSSSKKRFRTKFTQHQKDKMLVFAEKLGWRMQKNDESIVQEFCSEIGVQRHLLKVWMHNNKHTLGKKP 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02641 233 MobiDBLite consensus disorder prediction 135 176 - -
Gma08g02641 233 SUPERFAMILY Homeodomain-like 156 231 IPR009057 -
Gma08g02641 233 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 39 88 IPR006456 -
Gma08g02641 233 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 45 232 - -
Gma08g02641 233 Pfam ZF-HD protein dimerisation region 45 89 IPR006456 -
Gma08g02641 233 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 45 232 - -
Gma08g02641 233 Gene3D - 156 231 - -
Gma08g02641 233 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 45 88 IPR006456 -
Gma08g02641 233 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 170 226 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02641 Gma-Chr8 40695728 40696504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02641 45 229 ZF-HD Transcription Factor Family AT4G24660 53.439 2.78e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma08g02641 ZF-HD_dimer 7.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02641 - - gmx:100781241 389.808