Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02637 atgggctcagaaatctaccctaaggttcatgagaaccctagggccttcttcaacagctctagcccaatcttcttggagcctcttgctcatggttctagtgattggtcccttcctagggaggattgcatcacttacccatttagGCACGAGGTAGCTGGTGTAGTGACAGAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGAGACAAGGTTGGTGTGGGATGCTTGGTTGATTCCTGCCGCACCTGCCAGAACTGTGATGACAATCTTGAGAATTATTGTCCTCAATATACGCTCACATATGGTGCCAAATATAGAGATGGCACCATCACATACGGAGGCTACTCTAACTCAATGGTTGCAGATGAGCATTTTGTGATTCGCATTCCTGATAGCTTAGCACTTGATGCTGCTGCACCTCTTCTTTGTGCTGGCATCACTGTGTATAGCCCTCTCAGATATTATGGACTTGACAAGCCTGACCTACATGTTGGTGTGGTTGGTCTCGGTGGACTAGGCCACATGGCAGTCAAGTTTGCCAAAGCTTTTGGAGCTAAGGTTGCTAGACAACATCTTGGAGTTGATTCCTTTCTACTAAGCCGTGACCAACATCAGATGCAGGCTGCAATGGGTGCTTTGGATGGTATTATTGACACAGTTTCTGCGGTTCATCCTCTCTTACCTCTCATTGGTTTGCTCAAGTCTCATGGAAAGATTGTAATGGTGGGTGCACCAGAGAAGCCTTTGGAACTGCCAGTCTTTCCTTTACTTGATGGGAGAAAGATAGTAGCTGGCAGTCTGATTGGAGGGTTAAAGGAGACACAAGAAATGATTGATTTTGCAGCGAAACACAATGTCAAACCTGACATTGAAGGGCAAGAGGTTAACATCAACATTGGTATAGAGAATGGAGACTATAGTATAGTAGGAGGAGTTGCTATTAAGGATCCATCTGCTCCCCATGGAGTTCGACTTTTGATTGAGGACTATCCTTATGCTTCTGATGGGCTAGAGATATGGGATGCTATCAAGTCTTGGGTGGAAGAATATGTCTCATTCTACTACAAGTCAGCTGAGGAACTTCAAAAAGACCCCGAGCTCCAAGCTTGGTGGAAAGAACTTGTAGAGTATCCATATGGAGGTTTAATCCTGAATAGGCCAACTATTAGCAGGAGATTCATGCCTGAGAAAGGGTCTCCTGAATATGATGCGCACGCATCTGATGAGTTCTACCTTGGGCAGAGAGATGGTGGTGACTACTGGACATCTGATGCCGGGCCATTAGAGGCCTTTAAGAGGTTTGGAAAGAATCTTGAAGAGATTGAAAAGAAGCTTATAGAGAAGAACAATGATGAGACATTGAGAAACCGCTATGGGCCGGCTAAAATGCCTTACACTTTGCTCTATCCTTCTAGTGAGGAGGGATTGACTTTCAGAGGAATTCCCAACAGTATCTCTATCTAA 1464 0.4037 MGSEIYPKVHENPRAFFNSSSPIFLEPLAHGSSDWSLPREDCITYPFRHEVAGVVTEVGSKVEKFKVGDKVGVGCLVDSCRTCQNCDDNLENYCPQYTLTYGAKYRDGTITYGGYSNSMVADEHFVIRIPDSLALDAAAPLLCAGITVYSPLRYYGLDKPDLHVGVVGLGGLGHMAVKFAKAFGAKVARQHLGVDSFLLSRDQHQMQAAMGALDGIIDTVSAVHPLLPLIGLLKSHGKIVMVGAPEKPLELPVFPLLDGRKIVAGSLIGGLKETQEMIDFAAKHNVKPDIEGQEVNINIGIENGDYSIVGGVAIKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVEEYVSFYYKSAEELQKDPELQAWWKELVEYPYGGLILNRPTISRRFMPEKGSPEYDAHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02637 487 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 405 487 IPR013819 GO:0016702|GO:0046872
Gma08g02637 487 SMART PKS_ER_names_mod 25 309 IPR020843 GO:0016491
Gma08g02637 487 Pfam Lipoxygenase 404 470 IPR013819 GO:0016702|GO:0046872
Gma08g02637 487 Pfam Lipoxygenase 310 375 IPR013819 GO:0016702|GO:0046872
Gma08g02637 487 Gene3D - 307 375 - -
Gma08g02637 487 Gene3D - 144 267 - -
Gma08g02637 487 SUPERFAMILY GroES-like 47 176 IPR011032 -
Gma08g02637 487 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 311 382 IPR013819 GO:0016702|GO:0046872
Gma08g02637 487 SUPERFAMILY Lipoxigenase 311 487 IPR036226 -
Gma08g02637 487 CDD CAD1 30 291 - -
Gma08g02637 487 Gene3D - 49 295 - -
Gma08g02637 487 PANTHER ALDEHYDE REDUCTASE 28 292 - -
Gma08g02637 487 Gene3D - 376 486 - -
Gma08g02637 487 Pfam Zinc-binding dehydrogenase 171 282 IPR013149 -
Gma08g02637 487 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 135 287 IPR036291 -
Gma08g02637 487 Pfam Alcohol dehydrogenase GroES-like domain 49 128 IPR013154 -
Gma08g02637 487 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 28 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02637 Gma-Chr8 40602288 40607646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02637 44 291 Monolignol Biosynthesis Gene Families AT4G37990 66.412 5.73e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02637 - K23232 gmx:100816901 421.394