Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02622 ATGGCTGGTGCCACGAATTGGCTTACGTTTTCGTTGACTCACATGGAAATGCAGCAGTTCGGTCCATACGACACCACCACTCACTCTCACTGCTTCAACGACAGCAATTTTTATGGGTGGACGAATTCTAAGAGCGTCATGGATTCACAGAGTGAGACCCAACAACTTGCGGTGCCAAAAATGGAAGATTTTTACTTCGGTGATCACCAGCAAGATCTGAAGGCGATGATTGTTCCTGGGTTCAAAGCGTTGTCTGGGACCAACTCGGGGTCCGAGGTGGATGACTCGACCTCCAACAAGACGGTGACTCGGGTTGCACCCGCTGCGTTGGGCGGTGCTCACTCTGGCGAATCTAATTGTAAAGGATCAGCTTTGACTTTATGCGATGTTGCTGCGAATGGTTCTGATGATAGTAATAATAAGGCCGTTGTTGCCGTGGGGTTTGATACTCGGAAGAAGGTTGCTCATACGTTTGGCCAGCGAACTTCAATTTACAGAGGGGTCACAAGGCACCGATGGACGGGAAGATATGAAGCGCATCTATGGGATAACAGCTGTAGGCGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGGTTTTTTTCTTTTCTCTCTACGTGGATATGACAAGGAAGATAAGGCTGCGAGGGCTTATGATTTAGCAGCTCTAAAGTACTGGGGACCAACAGCCACGACTAACTTTCCTATTTCCAATTATACAAAGGAATTGGAGGAGATGGAACATGCAGGAAGGCAAGAATTTATTGCATCACTGCGAAGGAAAAGTAGTGGTTTTTCAAGGGGAGCTTCTGCTTACAGAGGTGTTACAAGGCATCACCAACAGGGTAGATGGCAAGCAAGAATTGGCCGAGTTGCGGGAAACAAGGATCTATACTTGGGAACATTTTCAACTGAAGAGGAGGCAGCAGAGGCTTATGACATTGCAGCCATAAAGTTCAGAGGTTCGAGCGCCGTAACCAATTTCGAGATGAGTCGATATGACGTCGACACTATATTGAACAACTCGCTTCCAGTTGGTGGCGTAGCAAAGCGCTTGAAAGTTTCCCCAGCAACGGAGAACAAAGCTCTTATCAGCACCATTATTCAACCACCTCAGAACACAAACGCAAGTAGCAGCATCAATTTCTCAGCCATTCAGCCAGTTTCTTCTATACCCTATGATTCTGCAATCACATGTTACCCCCACAACTTCTTCCACCACCATTTCAATCCTACCAACGGTGGAACTAGCTCATCAGATTCTGCTGCTGCTGCAGCAGTGACCGATGCGATTGCACTCAATACCCTTCCACCACCAGCAGTTCCTGGGTTCTTCATATGGCCTCACCAGTCCTACTGA 1356 0.4794 MAGATNWLTFSLTHMEMQQFGPYDTTTHSHCFNDSNFYGWTNSKSVMDSQSETQQLAVPKMEDFYFGDHQQDLKAMIVPGFKALSGTNSGSEVDDSTSNKTVTRVAPAALGGAHSGESNCKGSALTLCDVAANGSDDSNNKAVVAVGFDTRKKVAHTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGFFLFSLRGYDKEDKAARAYDLAALKYWGPTATTNFPISNYTKELEEMEHAGRQEFIASLRRKSSGFSRGASAYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGSSAVTNFEMSRYDVDTILNNSLPVGGVAKRLKVSPATENKALISTIIQPPQNTNASSSINFSAIQPVSSIPYDSAITCYPHNFFHHHFNPTNGGTSSSDSAAAAAVTDAIALNTLPPPAVPGFFIWPHQSY 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02622 451 Pfam AP2 domain 270 320 IPR001471 GO:0003700|GO:0006355
Gma08g02622 451 Pfam AP2 domain 164 226 IPR001471 GO:0003700|GO:0006355
Gma08g02622 451 ProSiteProfiles AP2/ERF domain profile. 270 328 IPR001471 GO:0003700|GO:0006355
Gma08g02622 451 ProSiteProfiles AP2/ERF domain profile. 164 234 IPR001471 GO:0003700|GO:0006355
Gma08g02622 451 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 67 448 - -
Gma08g02622 451 SUPERFAMILY DNA-binding domain 269 330 IPR016177 GO:0003677
Gma08g02622 451 Gene3D AP2/ERF domain 270 330 IPR036955 GO:0003700|GO:0006355
Gma08g02622 451 Gene3D AP2/ERF domain 164 236 IPR036955 GO:0003700|GO:0006355
Gma08g02622 451 PRINTS Ethylene responsive element binding protein signature 310 330 IPR001471 GO:0003700|GO:0006355
Gma08g02622 451 PRINTS Ethylene responsive element binding protein signature 165 176 IPR001471 GO:0003700|GO:0006355
Gma08g02622 451 SUPERFAMILY DNA-binding domain 163 236 IPR016177 GO:0003677
Gma08g02622 451 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 67 448 - -
Gma08g02622 451 CDD AP2 163 236 IPR001471 GO:0003700|GO:0006355
Gma08g02622 451 CDD AP2 269 330 IPR001471 GO:0003700|GO:0006355
Gma08g02622 451 SMART rav1_2 270 334 IPR001471 GO:0003700|GO:0006355
Gma08g02622 451 SMART rav1_2 164 240 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02622 Gma-Chr8 40196347 40202161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02622 65 451 AP2-EREBP Transcription Factor Family AT5G65510 54.348 2.53e-121 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma08g02622 AP2 9.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02622 K09285 - gmx:100814405 862.833