Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02590 ATGATGTCCTTGCGCTGCGCTAAAACCTACTGGTCTCCCAGTGTCGTTAGGTTACCTTCACTATTCTTAAGCCGAATTCGACAACACCGTACAGTACTTGCTTCGACTTACTGTATTGTGCGTTGCATTGCCCCTTCATCACATCATCAACAACGTTCACTGGTAAATGATGATGAAAACCACCACAAAGGTGACACCTTTACTGTGTCTTACCTCATCAACTCATGGGGGTTGTCCCCAAAACGGGCCAGGGAACTCTCCAACAGGATCAATTTGAAAAACCCAGATGGCCCAAACGCTGTTATTGATCTTCTCAACAACTATGGGTTTGAAAAAACCCATCTTGCAAAACTTGTGGAGAGAAAGCCCTCAGTGCTTCTTGCGGATGCAGAGAATACCCTTTTGCCTAAACTCAAGTTCTTCCGTTCTATTGGGATTTCCAACACTGACATGCCTAAAATCCTAATTGCTAGCCATAATATGTTGTTCAGAAGCTTGAACAAATGCCTCATTCCACGGTATGAGATCCTAAAGAGTGTACTTCGTGACAAAGGGGAAGTTGTTAGAGCTTTGAAAAATGCCCCATTTAGTTTTACGTATGGTGACATGATGAAACGCTTGGTTCCAAACATTAGGGTTTTGAGGGAATCTGGTGTGCCTCAAGGTTCCATTTCTTATCTGTTGATGCATTCTAGGTCTCTAGCTTACAGGGACCATTCCAAATTTGTGGAAGCTGTCAACACTGCTAAGGAATTTGGGTTTAATCCTTTGAGAAGAACTTTTGTCGTGGGTGTTGAAGTTCTTGCCATTAAGAGATGGGAATCAAGGTTTGAGGTTTATGAGAGGTGTGGCTGGAACCGCGAAATAGCTCTTCGAGCAGTTCGAAAGTTTCCCAGTGTTGTGAAGTTGTCAGAGGAAGTGTTTATAAAAAAAATGAGTTTTCTAGTGAAGGATATGGGTTGGCCATCAGAAGATATTGCTGAATATCCTCAAGTTGTAACGTACAACTTGGAGAAGAGGATTATCCCTAGATTCTCGGTAATCAAAATGTTGAAATCAAAAGGTCTGCTCAAGAATAATTTGCACTTTAGTGGCATTATTTGCATAACCGAGGCGAAGTTTTTGAAGAAATTTGTCATTAGTTTTCAGAAAGATTTGCCTTTCTTGCCAGATTTCTACAACAGTTTGGCAAATCAACAGAATGTATTATAG 1212 0.4125 MMSLRCAKTYWSPSVVRLPSLFLSRIRQHRTVLASTYCIVRCIAPSSHHQQRSLVNDDENHHKGDTFTVSYLINSWGLSPKRARELSNRINLKNPDGPNAVIDLLNNYGFEKTHLAKLVERKPSVLLADAENTLLPKLKFFRSIGISNTDMPKILIASHNMLFRSLNKCLIPRYEILKSVLRDKGEVVRALKNAPFSFTYGDMMKRLVPNIRVLRESGVPQGSISYLLMHSRSLAYRDHSKFVEAVNTAKEFGFNPLRRTFVVGVEVLAIKRWESRFEVYERCGWNREIALRAVRKFPSVVKLSEEVFIKKMSFLVKDMGWPSEDIAEYPQVVTYNLEKRIIPRFSVIKMLKSKGLLKNNLHFSGIICITEAKFLKKFVISFQKDLPFLPDFYNSLANQQNVL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02590 403 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 43 395 - -
Gma08g02590 403 Pfam mTERF 102 255 IPR003690 GO:0003690|GO:0006355
Gma08g02590 403 Pfam mTERF 274 374 IPR003690 GO:0003690|GO:0006355
Gma08g02590 403 Gene3D Transcription termination factor 3, mitochondrial 183 386 IPR038538 -
Gma08g02590 403 PANTHER CGI-12 PROTEIN-RELATED 43 395 IPR003690 GO:0003690|GO:0006355
Gma08g02590 403 SMART mt_12 116 147 IPR003690 GO:0003690|GO:0006355
Gma08g02590 403 SMART mt_12 188 220 IPR003690 GO:0003690|GO:0006355
Gma08g02590 403 SMART mt_12 152 183 IPR003690 GO:0003690|GO:0006355
Gma08g02590 403 SMART mt_12 224 255 IPR003690 GO:0003690|GO:0006355
Gma08g02590 403 SMART mt_12 323 357 IPR003690 GO:0003690|GO:0006355
Gma08g02590 403 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02590 Gma-Chr8 39161951 39163319 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma08g02590 mTERF 6.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02590 K15032 - gmx:102670177 690.263