LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma08g02587	ATGGCAGTTCCACCAGAAATGGAGCATCCCAGGAAGGCTTTTGGATGGACAGCTAGAGACACATCTGGGGTTCTCTCCCCTTTCAAGTTCTCAAGAAGGGAAACAGGAGAGAAAGATGTAGCATTCAAAGTATTGTACTGTGCTATATGTCACTCGGACCTCCATATGTTGAAGAACGAATGGGGCATTTCCACTTATCCTCTAGTACCCGGGCTAACTCTTGATGCTGCTGCTCCTCTCCTCTGTGCTGGGATCACAGTGTATAGCCCTTTGAGATATTTTGCACTTGAAGAGCAAGGGATGCAATTGGGTGTGGTTGGTCTTGGTGACCTTGACCATATGGCTGTCAAGTTTGCCAAAGCTTTTGGGGCTAAGGCTGCAATAGGCACCTTGGATGGTATAATAGACACAGTTTCTGCCATCCATCCTCTGCCCCCTCTGTTAGGTATGTTGAAGTCTCAAGGGAAACTTGTCATGGTTGGTTTACCAGAGAAGCCTCTAGAGCTACCAATCTTCCCTTTACTTGCAGGGGGAAAGATAATAGCTGGGTCATTGGAGGAATTAAGGAGACACAAGAAATGA	582	0.4674	MAVPPEMEHPRKAFGWTARDTSGVLSPFKFSRRETGEKDVAFKVLYCAICHSDLHMLKNEWGISTYPLVPGLTLDAAAPLLCAGITVYSPLRYFALEEQGMQLGVVGLGDLDHMAVKFAKAFGAKAAIGTLDGIIDTVSAIHPLPPLLGMLKSQGKLVMVGLPEKPLELPIFPLLAGGKIIAGSLEELRRHKK	193

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma08g02587	193	Pfam	Alcohol dehydrogenase GroES-like domain	38	71	IPR013154	-
	Gma08g02587	193	Gene3D	-	83	127	-	-
	Gma08g02587	193	PANTHER	ALDEHYDE REDUCTASE	2	71	-	-
	Gma08g02587	193	PANTHER	ALDEHYDE REDUCTASE	125	185	-	-
	Gma08g02587	193	Gene3D	-	128	191	-	-
	Gma08g02587	193	PANTHER	CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN	2	71	-	-
	Gma08g02587	193	Gene3D	-	4	72	-	-
	Gma08g02587	193	Gene3D	-	73	82	-	-
	Gma08g02587	193	PANTHER	ALDEHYDE REDUCTASE	72	127	-	-
	Gma08g02587	193	SUPERFAMILY	GroES-like	7	115	IPR011032	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma08g02587	Gma-Chr8	39122758	39126372	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma08g02587	1	88	Monolignol Biosynthesis Gene Families	AT4G39330	55.682	9.61e-33	117

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma08g02587	-		K00083	mtr:MTR_5g031290	181.415

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