Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02585 ATGAAGGAGAAGGTGGTGGGATGGAGGAGCAAACGGGTTTTTTTCCTTTGGTGGCTTTGTTTCTTGCTCGGTGTCTGTTCTGAGAAGACAACATCAAGAAGAGGTTTAAGGGAGACCCTGGCCAAGAAATCGAGAACTTCTAATTCTGGAGTCATGCTGAATTCTAACAACCGCCAACAGTTGGTGGTTGACAATGGTATTGTCGCGGTTACCTTTTCAAAGCCTGAGGGCTACATACTTGGAATATCATATAACGGAATTCACAATATACTTGAAGATGAAAACGAAGATCAAGATAGAGGGTACTTGGACGTGGTTTGGAATACACCGGGAAAGCCTAGTAATTGTCAGAGAATATACGGGACAAAATTTTCGGTTATAGCAGCTGACGAGAATATGGTCGAGGTTTCATTCTCAAGAACATGGACATCATCCATGAATGACTCAAGTGTCCCCATGAATATTGACATGAGATACATTTTTCGAAATGGTGATTCAGGGTTTTATTCATATGCAATATTTGATCGCCCTGAAGGATTGCCCGCGGTGGAGATTGACCAAATTAGGATTGTATTCAAACTCAAGAAAGACAGGTTCAACTATATGGCTATATCAGATGAAAGGCAGAGAAGCATGCCAACGATAAGAGACAGAGAAGCTGGGCAAATCCTAGCATTCCCAGAAGCAGTTCTATTAACCAGACCAATCAGCCAAAAATTCAGAGGAGAGGTGGATGATAAATACCAGTACTCATGTGAGAACAAGGACAACAATGTTCATGGGTGGATCAGTGTTGATTCTTCTAATGCACCATCCGTGGGTTTCTGGATGATAACGCCCAGCAACGAGTTTCGCAATGCTGGGCCCATCAAGCAGGACCTTACTTCCCATGTTGGCCCCATCACTCTCGCGATGTTTATGAGTACTCACTATGCTGGCAAGGAGGTAACCATGGCATTTCAACAAGGAGAGACTTATAAAAAGGTTTTTGGCCCTGTATTCGCCTATTTTAACAATGCTTCAAGAGAGGATGATATACTATCCCTCTGGTCAGATGCTGTGCAGCAGCAATCTAAAGAAGTCACAAGTTGGCCTTACGATTTTCCTAAATCAGTAGATTTCATTCCACCGAATCAAAGGGGAATAGTTTTGGGAAGATTATTAGTCCAAGATAGGTACTTCAGAGGAGGTAAACTTCTATATGCTAACAATGCTTATGTTGGGCTAGCTTTGCCTGGAGATGAAGGATCATGGCAGATAGAAAGCAAGGGTTATCAATTCTGGACTCGAGCTGATACAAAGGGTTTCTTCCTAATAAATAATATTGTGCCAGGTGACTATAATTTTTATGCATGGATTCCTGGCTTCATTGGTGATTACAGATATAATGCTACAATCACCATCACACAAGGAGGAGTCATCAAATTGGATTCACTTGTGTATGTTCCTCCAAGAAATGGACCAACCCTATGGGAAATTGGGTTTCCAGATCGCACGTCTGCAGAATTCTATGTACCAGACCCTTATCCTACGCTCATGAACAAATTATACAACGAAGAGCACAGAGACAAGTTTAGGCAATACGGGTTGTGGGAACGTTATACTGATCTATATCCAAATGATGATCTTGTTTACACGGTTGGTGTTAGCAAGTATAGAAAGGATTGGTTTTATGCTCATGTTACGAGAAGCACAGGAAATAAGACATACCAGCCAACCACATGGCAGATTGTATTTGAACATCCAAATCAAATAATAAGAGGAAACTACACATTGCAACTGGCCTTGGCATGTACTGCTGATGCTGACCTTCAGGTTCGGGTCAATAACCCTAGTGCTAATCCACCAGACTTTGCAACGGGGAAAATGGGAGGAGATAGTGCCATAGCAAGGCATGGTGTGCATGGATTATATAGGCTATTCAGCATTAACGTACCAAGTGATCGATTTGTGAAAGGAACCAACACCATCTATCTGAGGCAGTCAAGAGCCATGAACCCTTTTCAAGGAGTTATGTATGATTATATCCGTTTAGAACGACCTCCATTAACACTGATTTAA 2061 0.4197 MKEKVVGWRSKRVFFLWWLCFLLGVCSEKTTSRRGLRETLAKKSRTSNSGVMLNSNNRQQLVVDNGIVAVTFSKPEGYILGISYNGIHNILEDENEDQDRGYLDVVWNTPGKPSNCQRIYGTKFSVIAADENMVEVSFSRTWTSSMNDSSVPMNIDMRYIFRNGDSGFYSYAIFDRPEGLPAVEIDQIRIVFKLKKDRFNYMAISDERQRSMPTIRDREAGQILAFPEAVLLTRPISQKFRGEVDDKYQYSCENKDNNVHGWISVDSSNAPSVGFWMITPSNEFRNAGPIKQDLTSHVGPITLAMFMSTHYAGKEVTMAFQQGETYKKVFGPVFAYFNNASREDDILSLWSDAVQQQSKEVTSWPYDFPKSVDFIPPNQRGIVLGRLLVQDRYFRGGKLLYANNAYVGLALPGDEGSWQIESKGYQFWTRADTKGFFLINNIVPGDYNFYAWIPGFIGDYRYNATITITQGGVIKLDSLVYVPPRNGPTLWEIGFPDRTSAEFYVPDPYPTLMNKLYNEEHRDKFRQYGLWERYTDLYPNDDLVYTVGVSKYRKDWFYAHVTRSTGNKTYQPTTWQIVFEHPNQIIRGNYTLQLALACTADADLQVRVNNPSANPPDFATGKMGGDSAIARHGVHGLYRLFSINVPSDRFVKGTNTIYLRQSRAMNPFQGVMYDYIRLERPPLTLI 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02585 686 Gene3D - 52 354 IPR014718 GO:0030246
Gma08g02585 686 CDD RGL4_C 491 679 - -
Gma08g02585 686 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 54 682 - -
Gma08g02585 686 Pfam Polysaccharide lyase family 4, domain II 403 475 IPR029413 -
Gma08g02585 686 CDD RGL4_M 379 479 IPR029413 -
Gma08g02585 686 SUPERFAMILY Galactose mutarotase-like 55 342 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gma08g02585 686 CDD RGL4_N 60 346 - -
Gma08g02585 686 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 54 682 - -
Gma08g02585 686 SUPERFAMILY Galactose-binding domain-like 486 679 IPR008979 -
Gma08g02585 686 Gene3D - 487 679 - -
Gma08g02585 686 Pfam Rhamnogalacturonate lyase family 49 244 IPR010325 -
Gma08g02585 686 SUPERFAMILY Starch-binding domain-like 376 478 IPR013784 GO:0030246
Gma08g02585 686 Pfam Polysaccharide lyase family 4, domain III 489 678 IPR029411 -
Gma08g02585 686 Gene3D - 376 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02585 Gma-Chr8 39064830 39073842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02585 60 681 Polysaccharide Lyase AT1G09890 56.160 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02585 K18195 - gmx:100791732 1416.36