Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02574 ATGTTCTCTTACAAAGAACTTGTTGTGGCTACCAACAACTTCTCCATGGAAAACAAGTTGGGTGACAGAGGGTTTGGTGCTATTTACAAAGGCCTCATTGTAGACTCAGATTTGGAAATTCCTGTGAAGGAGATATCAAGGAGTTCAAGGCAAGGCAAGAAAGAGGTTGGATCATTATTGCTCTATCGTCATGAAGAATGTGAAAATTGTGTGGTGCATCGTGACCTAAAATCAAGCAATATGATGCTAGATTCCAATTCCAATGCCAAGCTTGGTGACTTTGGGATGACAAAGCTAATAGACCATGATGTGGGGTCCCAAAGCATAGGGTTGGTTGGAAAATTGGGCTACATGTCCCCAGAATACGTTGCCACATGTAGGGCTAGCAAGGAGCATGATGTTTATAGCTTTGGGGTGGTTGCATTAGAATTTGCCACAGGAAAAAAAAGCATTGCATGTAGGGATGTGGTGTACACACCTTGGTAG 486 0.428 MFSYKELVVATNNFSMENKLGDRGFGAIYKGLIVDSDLEIPVKEISRSSRQGKKEVGSLLLYRHEECENCVVHRDLKSSNMMLDSNSNAKLGDFGMTKLIDHDVGSQSIGLVGKLGYMSPEYVATCRASKEHDVYSFGVVALEFATGKKSIACRDVVYTPW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02574 161 Pfam Protein kinase domain 61 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02574 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02574 161 Gene3D Transferase(Phosphotransferase) domain 1 48 158 - -
Gma08g02574 161 PANTHER - 2 56 - -
Gma08g02574 161 SUPERFAMILY Protein kinase-like (PK-like) 2 150 IPR011009 -
Gma08g02574 161 PANTHER GPCR KINASE-RELATED 2 56 - -
Gma08g02574 161 PANTHER GPCR KINASE-RELATED 58 153 - -
Gma08g02574 161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 71 83 IPR008271 GO:0004672|GO:0006468
Gma08g02574 161 PANTHER - 58 153 - -
Gma08g02574 161 SMART serkin_6 14 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02574 Gma-Chr8 38791199 38791887 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02574 2 55 Receptor kinase-like Gene Family AT5G10530 44.444 9.65e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma08g02574 Pkinase 1.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02574 - - dcr:108217109 164.081