Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02554 ATGAAGAAGGTTTTCCTGTTTGCAAACTCAAAATGTAAGAGGTATTTCCATAATCGCCTGAAGCATTCAAAGCTCACCTGGACTGTAGTGTACAGAAAGCAACACAAAAAGGACATTGCTCAAGAAGTTGTGAAGAAGAGGAGACGTGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCAACCTTGGAAGTAATCCAAAAAAAAAAAGAGCTGAGAAGCCAGAAGTTCGAGATGCAGTTAGGGAAGCTGCTCTTCGtgaaattaaggagaggatcaagaaaacaaagaatgagaagaaggctaagaaaGCAGAAGTTGCTTCCAAGTCGTAAAAAACAGGACAAACTTGGCGGTGCAGGCAGGAAACGCAGAGCTTTTAGTTTTGTTCCTAATTTTGGCAACAATTTAAATAGTTGTTTTAACAGTGCTGTACGAATATTCCATTTGCAACATTAA 462 0.3615 MKKVFLFANSKCKRYFHNRLKHSKLTWTVVYRKQHKKDIAQEVVKKRRRAAKKPYSRSIVGATLEVIQKKKELRSQKFEMQLGKLLFVKLRRGSRKQRMRRRLRKQKLLPSRKKQDKLGGAGRKRRAFSFVPNFGNNLNSCFNSAVRIFHLQH 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02554 153 Pfam Ribosomal protein L24e 2 41 IPR000988 -
Gma08g02554 153 Gene3D Ribosomal protein L24e 1 38 IPR038630 -
Gma08g02554 153 PANTHER 60S RIBOSOMAL PROTEIN L24 3 124 IPR000988 -
Gma08g02554 153 PANTHER 60S RIBOSOMAL PROTEIN L24-RELATED 3 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02554 Gma-Chr8 38166154 38168052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02554 3 80 Cytoplasmic Ribosomal Protein Gene Family AT3G53020 76.923 5.25e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02554 K02896 - gmx:100499979 125.946