Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02545 ATGGCGTCCGATGGCTTTACCGACAAGAACACCGTGTTCAGAAAGCTCAAGGCGAAGTCTGAAAATAAGATGTGTTTCGATTGCAATGCGAAGAACCCTACCTGGGCGTCCGTCACGTATGGGATCTTTCTCTGCATCGATTGCTCCGCCGTACACCGCAGTCTCGGCGTGCACATCAGCTTCGTGAGGCAAGTTTTTGCTGATTTTGTTTCAATGAGCACTGCGTTGTATTGCTGCGCTGTGTCATTTCTTTTAGGGATTTCTCCAAGTCAATTGGCTAAAGCTTTTGAATAG 294 0.4762 MASDGFTDKNTVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRQVFADFVSMSTALYCCAVSFLLGISPSQLAKAFE 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02545 97 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 2 66 - -
Gma08g02545 97 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H 2 66 - -
Gma08g02545 97 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 68 IPR001164 GO:0005096
Gma08g02545 97 SUPERFAMILY ArfGap/RecO-like zinc finger 11 76 IPR037278 -
Gma08g02545 97 SMART arf_gap_3 10 97 IPR001164 GO:0005096
Gma08g02545 97 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Gma08g02545 97 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Gma08g02545 97 Pfam Putative GTPase activating protein for Arf 11 70 IPR001164 GO:0005096
Gma08g02545 97 Gene3D Arf GTPase activating protein 2 81 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02545 Gma-Chr8 37919625 37920247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02545 7 68 C2H2 Transcription Factor Family AT3G07940 48.387 1.98e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02545 K12493 - gmx:100785169 136.732