Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02536 ATGTCGTCATCATCGGCCACAGCGCCATACAACACCCCGCCGGCACTGATCGCCTTCTTGCTGGGCATGCTCGTGGTGTGCTTTGTGGTGTTCAGCATTGTGTACATGTGCAAGTATTGCTTCTCTGGTGTGATCAACACCTGGGCTTCCCAGCCTATCATTTCGAGCTCCCTCATTCGCCTTACACCGTTTAGGTCCCCTCCTCGAGGCCTCGACCCAAAGCTTCTCCAGGTTTTCCCCACCTTCCCTTACGCCTCTATTAAAGACCTTAGCAAGGATCAAAAGTACGACCTCGAATGTGCAATTTGCTTGTTGGAGTTCGAGGATGATAACATGGTTCGCCTCTTGACGCTCTGTTGCCACGTCTTCCACCAGGATTGCATTGATCTCTGGCTCCGCTCGCACAAGACCTGCCCCGTTTGTCGACGACACCTCGATTCGCCCCCGAATGAAATAGAGAAAGTTGTGGACGTTAACGAGGGTGTGGTGGTCACGTCCACGAGTAGGGAGATACATATTGATGTAATAGAAGGGAAATTGGATGGTTGTGGCGATGATGATGATGATGATACAAGTGGTGGAAATAAAAAACAAGAACATGAACATGGTCATGAGAATCATGAGGTGATCACTCATCAACAAGGGGGAAAAACATTTGCACGGTCACATTCGACGGGGCACTCGATAGTTTTGATAAGAGGAGATGGAAATAAGGGAAAAAATGATCATGAGAAGTATACGTTGATATTGCCGGAGCATGTTTTGAGAGAGAGGCATAATAATAAGCACAATTGTACAAGGAGTTGTGTGAGTTACAAGGACATGGCCATGCTTGTTGCTCCTCTTCCTGTTGCACCTTATAGTAATTGTGGCTTTGTTCAACCAGTTTCGCCAGCTGGCACCTCCTCCCCTGACCATACTCAGAAATAA 930 0.4785 MSSSSATAPYNTPPALIAFLLGMLVVCFVVFSIVYMCKYCFSGVINTWASQPIISSSLIRLTPFRSPPRGLDPKLLQVFPTFPYASIKDLSKDQKYDLECAICLLEFEDDNMVRLLTLCCHVFHQDCIDLWLRSHKTCPVCRRHLDSPPNEIEKVVDVNEGVVVTSTSREIHIDVIEGKLDGCGDDDDDDTSGGNKKQEHEHGHENHEVITHQQGGKTFARSHSTGHSIVLIRGDGNKGKNDHEKYTLILPEHVLRERHNNKHNCTRSCVSYKDMAMLVAPLPVAPYSNCGFVQPVSPAGTSSPDHTQK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02536 309 PANTHER RING FINGER DOMAIN-CONTAINING 4 276 - -
Gma08g02536 309 CDD RING-H2_EL5_like 99 142 - -
Gma08g02536 309 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Gma08g02536 309 SUPERFAMILY RING/U-box 91 148 - -
Gma08g02536 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 148 IPR013083 -
Gma08g02536 309 MobiDBLite consensus disorder prediction 189 207 - -
Gma08g02536 309 Pfam Ring finger domain 99 142 IPR001841 -
Gma08g02536 309 MobiDBLite consensus disorder prediction 183 207 - -
Gma08g02536 309 PANTHER RING-H2 FINGER PROTEIN ATL29 4 276 - -
Gma08g02536 309 SMART ring_2 100 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02536 Gma-Chr8 37633698 37634627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02536 4 245 C3H Transcription Factor Family AT2G35420 30.738 6.95e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02536 - - gmx:102667755 610.527