Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02534 ATGGCGCCCTCGTTCGATCAAAGTGCAAACACAGTTTGCGTGATGGATGCTTCGGGTCAGTTAGGTGCCAGTCTGGTCCAACAATTACTTCTACGGGGATACCATGTCCATGCCTCTGTTCAATCACATGGGAACGAGCAACTCAATGGGATTTCTGCTGACCCCAATAGGCTCAAGATTTTCCATTTAGACCCATTTGATTACCATAGCATAACCGATGCTCTAAGAGGCTGCTCTGGCTTGTTTTATGTATTTGAACCACCTCAGGACCAACCCTACTATGATGAATACATAGCAGACGTAGAGGTCAGAGCAGCACACAATGTGATTGAAGCTTGCGCTCAAACAGAAACAATAGATAAAGTGGTTTTCACTTCATCTGCAACAGCTGTCGTTTGGAGGGAGGATCGCAAAGCCATGGAATCGAACATGGATGAGAAACATTGGAGTGATATCAATTTCTGTCGGAAGTTCAAGCTATGGCACGGGATGTCAAAGACAATGGCAGAGAGGACAGCGTGGGCCCTAGCAATGGACAGAGAGGTGAACATGGTGTCCATAAACGCAGGCTTGTTGATGAGTAGTGACCAACACCAAGATCTCTGCATCCAAAAAAACCCCTACCTCAGAGGAGCTTCGGAGATGTACGAAGATGGCGTGTTGGTGACCGTAGACTTAGGAATCTTGGTGGATACCCACATCTGTGTTTACGAAGATATCTCATCCTATGGTCGCTACTTGTGCTTCAACCACGTCATCAACACCCAACACGACGCCGTTCAGCTCGCCCACAAGACTACCACCCCTCTAAGCTGTGACCCAGGGAAAGAGTTTATCCAACAAAGAATAAGCAACAAGAAATTGAACGAACTGATGGTCAATTTTCGAGGAGGCAGAAAAGTAGCAGCCGTCGTTGCCGCCGAAGAAGAAGTCATTATCGTGATCGTCAGTGAAGAAGTTGCGGTTGATCTCATTCCAAGTGATTTTATCCATGTTATTAGGGATGCACATGTTTACCACAATCATGTGAGGCCTTTGCAGGAGAAGCTCCATAACCAGCCAAAACCTTTTCCAACTTTGGAGATAAATCCAAAAAAGAAAGATATAGATTCTTTTGTGGCTGTTGATTTCAAGCTCATAGGCTATGATCCTCACCAGAAGATTGATATGAAGCTGGCTGTCTAA 1185 0.4557 MAPSFDQSANTVCVMDASGQLGASLVQQLLLRGYHVHASVQSHGNEQLNGISADPNRLKIFHLDPFDYHSITDALRGCSGLFYVFEPPQDQPYYDEYIADVEVRAAHNVIEACAQTETIDKVVFTSSATAVVWREDRKAMESNMDEKHWSDINFCRKFKLWHGMSKTMAERTAWALAMDREVNMVSINAGLLMSSDQHQDLCIQKNPYLRGASEMYEDGVLVTVDLGILVDTHICVYEDISSYGRYLCFNHVINTQHDAVQLAHKTTTPLSCDPGKEFIQQRISNKKLNELMVNFRGGRKVAAVVAAEEEVIIVIVSEEVAVDLIPSDFIHVIRDAHVYHNHVRPLQEKLHNQPKPFPTLEINPKKKDIDSFVAVDFKLIGYDPHQKIDMKLAV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02534 394 Pfam Thymidylate synthase 321 394 IPR023451 -
Gma08g02534 394 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 315 394 IPR036926 -
Gma08g02534 394 CDD FR_SDR_e 12 293 - -
Gma08g02534 394 Gene3D - 4 314 - -
Gma08g02534 394 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 322 394 IPR036926 -
Gma08g02534 394 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 265 IPR036291 -
Gma08g02534 394 Pfam NAD(P)H-binding 17 136 IPR016040 -
Gma08g02534 394 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 298 - -
Gma08g02534 394 PANTHER - 7 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02534 Gma-Chr8 37514004 37528285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02534 12 295 Monolignol Biosynthesis Gene Families AT5G58490 31.715 4.38e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02534 - - gmx:100783579 605.52