Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02532 atgagtAAGATCAGCAACTTGAGTTCTGCAATCAGTTCTGATCTCATAGATGCCAAGCTTGAAGAGGACTGGCTAGGCTTGCCCGCAGGAGTGAAGTTTGATCCCACAGACCAAGAACTAATAGAACATCTTGAAGCCAAAGTGGAGGCAAAGAACATGAAATCACACCCTTTGATAGATGAGTTCATTCCCACTATTGAAGAAGAAGATGGAATTTGTTATACCCATCCAGAGAAGCTTCCAGCTGTGAGATATACACTGTGA 264 0.4205 MSKISNLSSAISSDLIDAKLEEDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEEEDGICYTHPEKLPAVRYTL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02532 87 Pfam No apical meristem (NAM) protein 28 82 IPR003441 GO:0003677|GO:0006355
Gma08g02532 87 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 19 83 IPR044799 GO:0003700
Gma08g02532 87 SUPERFAMILY NAC domain 23 84 IPR036093 GO:0003677|GO:0006355
Gma08g02532 87 ProSiteProfiles NAC domain profile. 27 87 IPR003441 GO:0003677|GO:0006355
Gma08g02532 87 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 19 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02532 Gma-Chr8 37493031 37493485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02532 15 83 NAC Transcription Factor Family AT5G56620 72.973 5.30e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma08g02532 NAM 3.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02532 - - gmx:100795246 136.346