Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02529 TATGCGTTGGATTTTGTGTATCTAAGCATAGCAATATTGTTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCATACTGGGGAACGTCAAGCTGCAAAGATGAGGATGGCATACTTAAGGTCAATGTTGAATCAAGATATAAGTCTTTTTGATACTGAGGCATCTACTGGAGAGGTTATTTCTTCTATTACAAGTGACATCATCGTTGTTCAAGATGCACTGTCTGAGAAGGTTGGGAATTTCATGCACTACATAAGCCGTTTTATCGCAGGCTTTACCATTGGTTTTGTCAGAGTGTGGCAGATCAGTTTAGTGACACTTGCCATTGTACCCTTAATTGCCCTTGCTGGAGGCCTTTATGCATACGTGACAATTGGTCTTATTGGAAAAGTTCGAAAATCATATGTGAGAGCTGGTGAGATCGCTGAAGAGGCAAGCAATGTGAGAACGGTACAAGCATTTGCAGGAGAAGAAAGAGCAGTGAGATCATACAAAGTAGCTCTGATGAACACATATAGAAATGGTCGAAAAGCAGGTTTAGCAAAGGGTCTGGGATTAGGCTCTATGCATTGTGTCCTTTTCCTTTCATGGGCTCTTCTTGTTTGGTTCACTAGCGTAGTTGTTCACAAGAATATCGCCAATGGTGGCAACGCTTTCACTACCATGCTCAATGTAGTCATTTCTGGCCTGTCACTTGGGCAGGCAGCCCCAGATATTTCTGCATTTATAAGAGCAAAGGCAGCAGCTTATCCCATTTTTGAGATGATAGAGAGGGACACAATGAGCAAAGCCAGCTCAGAAAATGGTAAAAAGTTAAGCAAATTGGAAGGTCACATCCAGTTCAAGGATGTCTGTTTCAGTTATCCATCTCGTCCTGATGTGGTTATCTTCAACAATTTTTGTATTGAGATTCCTTCAGGGAAAATTTTAGCTCTTGTGGGAGGAAGTGGTTCTGGAAAGAGCACAGTTATATCGCTGATTGAGCGCTTTTATGAACCACTTTCTGGTCAAATACTATTAGATGGGAACAATATCAGGGAACTTGATCTTAAATGGCTTAGACAACAAATTGGATTGGTTAACCAAGAACCTGCACTTTTTGCAACAAGCATCAGGGAGAACATACTGTACGGAAAAGATGATGCCACTCTTGAAGAAGTAAATCAAGCTGTGATTCTTTCTGATGCTCAGTCTTTCATTAACAATCTTCCTGATGGGTTAGATACTCAGGTTGGTGAGAGAGGGATACAGTTATCAGGGGGACAGAAACAAAGGATAGCAATATCTCGTGCTATAGTTAAGAATCCATCAATCCTTTTATTAGATGAAGCAACCAGTGCTCTGGATTCAGAGTCGGAGAAAAGTGTACAAGAAGCTCTTGATCGTGTAATGGTTGGTAGAACAACCGTAATAGTTGCACACAGACTTTCTACCATTAGGAATGCAGATATGATCGTTGTTATTGAGGAGGGAGGAAAGGTGGTGGAAATTGGAAATCATGAGGAACTCATTTCCAACCCAAATAATAATGTATACGCATCTCTTGTTCAAATCCAAGAAAAGGCCTTTTCTCAAAGCCACATTTCTGGGGATCCTtacttgggagggtcatcaagGCACCTAGGAGAGTCATCATCCCGCGCAACAAGCTTTCGTGGTAGTTTCCGATCAGATAAAGAATCAACTAGCAAGGCTTTTGGAGATGAAGCCGAAGGTAGTGTTGGAAGTTCTTCAAGGCATGTCTCAGCAAGAAGACTGTATTCAATGATTGGTCCTGATTGGTTTTATGGTGTTTTTGGAACCTTGGGTGCATTTATTGCTGGAGCACAGATGCCACTTTTTGCTCTTGGAATCTCTCACGCTCTTGTATCTTATTACATGGACTGGGATACAACACGTCATGAAGTGAAAAAGGTTGCTCTACTCTTCTGTGGGGCAGCAGTTTTAACCATCACTGCGCATGCCATTGAACATCTTTCCTTTGGAATCATGGGGGAACGGCTTACTCTTCGGGCAAGAGAAAAAATGTTTTCTGCTATTTTGAAGAGTGAAATTGGCTGGTTTGATGACATAAACAACACAAGTTCTATGCTTTCATCACGTTTAGAGACTGATGCAACATTTTTAAGAACTGTAGTTGTTGATCGATCAACGATTCTTCTGCAGAATGTTGGTCTGGTTGTTGCTTCATTTATTATTGCCTTCATGTTGAACTGGAGGATAACGCTTGTTGTATTGGCCACATACCCTTTAATCATTAGTGGTCACATTAGTGAGAAACTATTTATGCAAGGATTTGGGGGCAACCTGAGCAAAGCATATCTAAAAGCCAACATGTTGGCTGGGGAGGCTGTGAGTAATATCCGCACTGTGGCTGCATTTTGTGCTGAACAAAAGGTCCTTGACCTTTATGCTCATGAGCTTGTGGAGCCTTCCAAGCGTTCATTCAATCGGGGCCAAATTGCTGGCATATTCTATGGCATTTCCCAGTTCTTTATTTTCtcttcttatggccttgccttgtgGTATGGATCCGTGTTGATGGAAAAGGAGCTTTCTAGCTTCAAATCAATTATGAAGTCATTTATGGTTTTAATCGTAACAGCGCTGGCTATGGGGGAGACGTTGGCACTGGCACCTGACCTTTTGAAGGGAAATCAAATGGTTGCATCGATTTTTGAAGTGATGGATAGAAAGACAGGAATATTGGGAGATGTTGGAGAAGAACTGAAGACAGTGGAAGGAACAATTGAGCTAAAAAGAATCCATTTCTGCTACCCTTCAAGGCCAGACGTGGTTATTTTCAATGATTTCAATCTTAAAGTGCTTGCAGGAAAGAATATTGCCTTGGTGGGGCATAGTGGTTGTGGTAAAAGCTCAGTCATCTCCCTTATACTCAGATTTTATGATCCAACATCTGGGAAGGTGATGATAGATGGAAAAGACATCAAGAAACTCAATTTGAAATCCCTTAGGAAACATATTGGCCTAGTTCAACAAGAACCGGCTCTTTTTGCAACATCAATCTATGAAAATATTCTTTATGGTAAGGAAGGAGCCTCAGAAGCAGAAGTGATTGAAGCAGCTAAACTTGCCAATGCTCATAGCTTTATCAGTGCTCTTCCTGAAGGCTACGCCACCAAAGTAGGTGAGAGAGGAGTTCAACTCTCAGGTGGCCAGAAACAAAGGGTAGCTATTGCTAGAGCTGTTTTGAAAAACCCCGAAATTTTGCTGCTAGATGAAGCCACCAGTGCACTTGATTTGGAGTCTGAGCGTGTTGTGCAACAAGCTCTAGACAAATTGATGAAGAACAGAACAACAGTTATAGTTGCACACAGGCTATCCACAATAACAAATGCAGACCAAATAGCAGTATTAGAGGATGGAAAGATAATTCAGAGAGGGACTCATGCAAGACTTGTAGAGAACACAGATGGAGCATACTACAAATTAGTCAGCCTTCAACAACAGCAGCATATACAAGAACATAATGATTAA 3498 0.4091 YALDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISSITSDIIVVQDALSEKVGNFMHYISRFIAGFTIGFVRVWQISLVTLAIVPLIALAGGLYAYVTIGLIGKVRKSYVRAGEIAEEASNVRTVQAFAGEERAVRSYKVALMNTYRNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSVVVHKNIANGGNAFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERDTMSKASSENGKKLSKLEGHIQFKDVCFSYPSRPDVVIFNNFCIEIPSGKILALVGGSGSGKSTVISLIERFYEPLSGQILLDGNNIRELDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEEVNQAVILSDAQSFINNLPDGLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDSESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADMIVVIEEGGKVVEIGNHEELISNPNNNVYASLVQIQEKAFSQSHISGDPYLGGSSRHLGESSSRATSFRGSFRSDKESTSKAFGDEAEGSVGSSSRHVSARRLYSMIGPDWFYGVFGTLGAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKKVALLFCGAAVLTITAHAIEHLSFGIMGERLTLRAREKMFSAILKSEIGWFDDINNTSSMLSSRLETDATFLRTVVVDRSTILLQNVGLVVASFIIAFMLNWRITLVVLATYPLIISGHISEKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVAAFCAEQKVLDLYAHELVEPSKRSFNRGQIAGIFYGISQFFIFSSYGLALWYGSVLMEKELSSFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASIFEVMDRKTGILGDVGEELKTVEGTIELKRIHFCYPSRPDVVIFNDFNLKVLAGKNIALVGHSGCGKSSVISLILRFYDPTSGKVMIDGKDIKKLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVIEAAKLANAHSFISALPEGYATKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDLESERVVQQALDKLMKNRTTVIVAHRLSTITNADQIAVLEDGKIIQRGTHARLVENTDGAYYKLVSLQQQQHIQEHND 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02529 1165 CDD ABC_MTABC3_MDL1_MDL2 279 519 - -
Gma08g02529 1165 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 1159 - -
Gma08g02529 1165 Gene3D - 907 1165 IPR027417 -
Gma08g02529 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 519 IPR027417 -
Gma08g02529 1165 MobiDBLite consensus disorder prediction 534 575 - -
Gma08g02529 1165 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 279 516 IPR003439 GO:0005524
Gma08g02529 1165 Pfam ABC transporter 936 1084 IPR003439 GO:0005524
Gma08g02529 1165 Pfam ABC transporter transmembrane region 2 228 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g02529 1165 Pfam ABC transporter transmembrane region 599 870 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g02529 1165 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1159 IPR039421 -
Gma08g02529 1165 Gene3D - 277 549 IPR027417 -
Gma08g02529 1165 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 598 884 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g02529 1165 SUPERFAMILY ABC transporter transmembrane region 584 898 IPR036640 GO:0005524|GO:0016021
Gma08g02529 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 911 1155 IPR027417 -
Gma08g02529 1165 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 252 - -
Gma08g02529 1165 Gene3D ABC transporter type 1, transmembrane domain 4 893 IPR036640 GO:0005524|GO:0016021
Gma08g02529 1165 SMART AAA_5 306 492 IPR003593 -
Gma08g02529 1165 SMART AAA_5 944 1116 IPR003593 -
Gma08g02529 1165 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 244 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g02529 1165 ProSitePatterns ABC transporters family signature. 1056 1070 IPR017871 GO:0005524
Gma08g02529 1165 ProSitePatterns ABC transporters family signature. 418 432 IPR017871 GO:0005524
Gma08g02529 1165 CDD ABC_6TM_Pgp_ABCB1_D2_like 587 902 - -
Gma08g02529 1165 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 917 1153 IPR003439 GO:0005524
Gma08g02529 1165 CDD ABC_MTABC3_MDL1_MDL2 917 1155 - -
Gma08g02529 1165 SUPERFAMILY ABC transporter transmembrane region 2 249 IPR036640 GO:0005524|GO:0016021
Gma08g02529 1165 Pfam ABC transporter 298 446 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02529 Gma-Chr8 37440431 37460361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02529 1 1161 Calmodulin-binding Proteins AT2G36910 50.796 0.0 1175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02529 K05658 - gmx:100809752 2202.56