Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02507 ATGGCTCGCTCAGTGCCTTTGGTTTCAACCATTTTTGTCTTGCTTCTTCTTCTGATAGCCACCGAGATGGGGCCAACAATGGTGGCAGAAGCAAGAACTTGTGAGTCTCAGAGCCATCGTTTCAAGGGGCCATGTTTAAGTGACACCAACTGTGGCTCTGTTTGCCGAACCGAAGGTTTCTCTGGAGGACACTGCCGTGGCTTCAGTCGCAGATGCTTCTGCACCAAAGAATATGACAATTATTACAAGTCTTCCGATGTAATAAGGTGTAAAGATGGATCCGGAAAATTCACCAAGGCGCAGTTGAATGATGATATGTGCGATTGTGTTGATGGCACCAATGAACCTGGTTTTTATTTTAATTATGAAATGTTTAATTATTAA 384 0.4349 MARSVPLVSTIFVLLLLLIATEMGPTMVAEARTCESQSHRFKGPCLSDTNCGSVCRTEGFSGGHCRGFSRRCFCTKEYDNYYKSSDVIRCKDGSGKFTKAQLNDDMCDCVDGTNEPGFYFNYEMFNY 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02507 127 PANTHER DEFENSIN-LIKE PROTEIN P322 1 77 - -
Gma08g02507 127 PANTHER DEFENSIN-LIKE PROTEIN 1 1 77 - -
Gma08g02507 127 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Gma08g02507 127 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Gma08g02507 127 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Gma08g02507 127 SUPERFAMILY Scorpion toxin-like 32 76 IPR036574 -
Gma08g02507 127 CDD Knot1 43 75 IPR003614 GO:0006952
Gma08g02507 127 Pfam Gamma-thionin family 32 76 - -
Gma08g02507 127 Gene3D - 32 77 IPR036574 -
Gma08g02507 127 SMART gth_4 33 76 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02507 Gma-Chr8 36746754 36748703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02507 1 77 Plant Defensins Gene Families AT2G02100 58.442 1.98e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02507 - - gmx:100798577 261.922