Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02489 ATGACAATCCTCTATGTGTTGCTCTTTCTGGGACTCTTGTGGGCTGAAATTCATGTCATTTCTTCATTCACTGATACTCGAGACGTTGTTGCACTTAGATCATTAAAAGATGCATGGCAACATACACCGCCCAGCTGGGACAAATCAGATGACCCGTGTGGAGCACCATGGGAAGGAGTGACCTGCAACAAATCAAGGGTTACTTCATTGGGACTGTCAACCATGGGCCTGAAGGGTAAATTAACTGGAGATATTGGTCAACTTACAGAATTAAGATCCTTGGACTTGTCATTTAATAGAGATTTAACAGGTCCTCTCTCCCCACAGTTAGGAGACCTCAGCAATCTAAATATCTTGATTTTGGCTGGTTGCAGCTTCAGTGGCAATATTCCAGATGACTTAGGAAAACTTTCAGAGCTATCTTTCCTGGCTTTGAATTCAAACAACTTCACTGGAAAAATACCTCCTTCATTGGGTAATCTCTCCAAACTTTATTGGTTGGACTTGGCAGACAATCAGCTGACAGGACCTATCCCAGTTTCAACCTCCAACACCCCTGGATTAGACCTTCTTTTAAAGGCTAAGCACTTCCATTTCAATAAGAACCAACTCTCAGGTTCCATTCCTCCCAAGCTCTTCAGCTCTGAGATGATACTCATACACATATTATTTGATGGAAATAATTTGAGTGGGACTATACCTTCAACACTAGTACTAGTTAAGAGCGTTGAGGTTCTCCGGCTTGATAGGAATTTCCTGACAGGAGAGGTTCCATCAGATATCAACAACCTTACAAACATCAATGAATTGAATTTAGCACATAACAAATTCATAGGTCCTTTGCCTGACTTAACTGGAATGGATACCCTCAACTATGTGGATCTTAGTAACAACTCTTTTGATCCATCTGATGCTCCAACTTGGTTCACAACTCTTCCATCACTCACCACTCTTATTATGGAGTTTGGATCCCTTCAAGGTCCTCTTCCATCGAAACTCTTTGACATTCCTCAAATACAGCAAGTGAAACTACGAAACAATGCATTGAACAATACATTCGACATGGGTGACAACATTTGTCCCCAATTGCAGCTTGTAGATTTGCAAGAAAATGAGATTTCCTCGGTGACACTCCGTGCACAATACAAAAATACATTGATTCTTATAGGAAATCCAGTGTGCAGTGGTAGTGCTCTTTCAAATACAAATTACTGCCAACTTCAGCAACAAGCTAAGCAACCCTATTCCACTAGCTTGGCTAATTGTGGAGGCAAATCTTGTCCTCCTGATCAGAAGCTCAGCCCCCAAAGTTGTGAATGTGCCTATCCATATGTAGGAACATTGTACTTTAGAGGACCCTCATTCAGAGAACTGTCCAGTGTAAATACTTTCCATTCACTTGAAATGAGCCTATGGGTGAAATTGGGTCTAACTCCTGGCTCAGTTTCTTTACAAAACCCCTTCTTCAATAGTGATGATTATCTTCAAGTGCAACTAGCACTCTTTCCACCAATAGGGCAATATTTTAACAGGTCAGAAGTTCAAAGACTTGGGTTTGAATTGAGTAATCAAACTTACAAGCCTCCAAAAGAGTTTGGACCTTACTACTTTATTGCATTTCCTTATCCTTTTCCAGGTTCCCAGAAAGGAGCTTCTCTTAACAAAGGTGTTGTTATTGGGATATCGATTGGCTGCACAGTTCTGGTTCTGAGCCTCATAGGGTTAGCTATATATGCAATTCTGCAAAAGAAGCGTGCAGAGAGAGCCATTGGATTAAGTAGACCATTTGCATCATGGGCACCAAGTGGCAAGGATAGTGGAGGTGCACCACAATTAAAGGGAGCAAGATGGTTCTCTTATGATGAGCTCAAAAAGTGCTCCAACAATTTCTCTGAAAGCAATGAGATAGGCTTTGGTGGCTATGGCAAGGTGTACAAAGGGGTTTTCCCTGATGGGAAAATAGTTGCAATCAAACGAGCTCAACAAGGATCGATGCAAGGAGGCGTAGAGTTCAAGACTGAAATTGAGTTGCTTTCAAGAGTTCACCACAAGAATCTTGTTGGTCTCGTTGGATTCTGTTTTGAACAAGGGGAACAAATGTTGATTTACGAATTTATGCCCAATGGAACACTTAGGGAGAGTTTGTCAGGGAGATCTGAGATTCATCTTGACTGGAAGAGGAGACTCCGCATTGCTCTTGGTTCCGCCAGAGGACTTGCATACTTACATGAGCTTGCCAACCCTCCCATAATCCACAGAGACGTGAAGTCGACTAATATATTGTTGGATGAAAATTTGACAGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTTGTATCAGACAGTGAGAAAGGACATGTTTCAACTCAGGTTAAAGGGACATTGGGTTATCTGGATCCAGAGTATTATATGACCCAACAACTCACTGAGAAGAGTGATGTGTACAGTTTTGGAGTAGTCATGCTTGAACTAATAACTTCAAGGCAACCAATTGAGAAGGGCAAGTACATTGTCCGCGAGGTGCGCATGCTGATGAATAAGAAGGATGATGAAGAACACAATGGTTTGAGGGAACTCATGGATCCAGTGGTAAGAAACACACCAAACCTCGTAGGATTTGGGAGGTTCTTAGAGTTGGCAATGCAATGTGTTGGGGAATCAGCTGCAGACCGTCCAACAATGAGTGAAGTTGTGAAAGCACTTGAAACCATTTTGCAGAATGATGGTATGAACACAAACTCTACCTCTGCATCCTCTTCTGCCACTGACTTTGGAGTTGGTAAGGGTGGAATGAGGCATCCCTACATTGATGGTACTTTCACTAAGAAGGACAATGTCAATGATAGTAGTAGTAGTGCGTTTGACTACAGTGGGGGGTACACACTTTCAACAAAAGTTGAACCCAAATAG 2910 0.421 MTILYVLLFLGLLWAEIHVISSFTDTRDVVALRSLKDAWQHTPPSWDKSDDPCGAPWEGVTCNKSRVTSLGLSTMGLKGKLTGDIGQLTELRSLDLSFNRDLTGPLSPQLGDLSNLNILILAGCSFSGNIPDDLGKLSELSFLALNSNNFTGKIPPSLGNLSKLYWLDLADNQLTGPIPVSTSNTPGLDLLLKAKHFHFNKNQLSGSIPPKLFSSEMILIHILFDGNNLSGTIPSTLVLVKSVEVLRLDRNFLTGEVPSDINNLTNINELNLAHNKFIGPLPDLTGMDTLNYVDLSNNSFDPSDAPTWFTTLPSLTTLIMEFGSLQGPLPSKLFDIPQIQQVKLRNNALNNTFDMGDNICPQLQLVDLQENEISSVTLRAQYKNTLILIGNPVCSGSALSNTNYCQLQQQAKQPYSTSLANCGGKSCPPDQKLSPQSCECAYPYVGTLYFRGPSFRELSSVNTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPIGQYFNRSEVQRLGFELSNQTYKPPKEFGPYYFIAFPYPFPGSQKGASLNKGVVIGISIGCTVLVLSLIGLAIYAILQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARWFSYDELKKCSNNFSESNEIGFGGYGKVYKGVFPDGKIVAIKRAQQGSMQGGVEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLIYEFMPNGTLRESLSGRSEIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSRQPIEKGKYIVREVRMLMNKKDDEEHNGLRELMDPVVRNTPNLVGFGRFLELAMQCVGESAADRPTMSEVVKALETILQNDGMNTNSTSASSSATDFGVGKGGMRHPYIDGTFTKKDNVNDSSSSAFDYSGGYTLSTKVEPK 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02489 969 SUPERFAMILY Protein kinase-like (PK-like) 616 912 IPR011009 -
Gma08g02489 969 SMART serkin_6 630 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02489 969 Gene3D Transferase(Phosphotransferase) domain 1 706 924 - -
Gma08g02489 969 Gene3D Ribonuclease Inhibitor 186 410 IPR032675 -
Gma08g02489 969 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Gma08g02489 969 Pfam Protein tyrosine and serine/threonine kinase 633 901 IPR001245 GO:0004672|GO:0006468
Gma08g02489 969 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 937 - -
Gma08g02489 969 PANTHER LRR RECEPTOR-LIKE KINASE 1 937 - -
Gma08g02489 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Gma08g02489 969 SUPERFAMILY L domain-like 42 395 - -
Gma08g02489 969 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Gma08g02489 969 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Gma08g02489 969 Gene3D Phosphorylase Kinase; domain 1 604 705 - -
Gma08g02489 969 CDD STKc_IRAK 636 904 - -
Gma08g02489 969 ProSiteProfiles Protein kinase domain profile. 630 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02489 Gma-Chr8 34666096 34673969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02489 6 969 Receptor kinase-like Gene Family AT1G79620 70.968 0.0 1436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma08g02489 PK_Tyr_Ser-Thr 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02489 - - gmx:100782142 1911.35