Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02480 ATGGGTAGTAGTGACATGGACAAAACTCCGAAAGAGAAGGAGTCTAAGACACCTCCAGCTACGTCACAGGAGCAGTCATCAACAACTGCCATGCCAACAACTAATCCTGACTGGTCTAACTTTCAGACATATTCTCCTATACCTCCACACGGGTTCTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGCGTCCAGCATTATATGCCTCCCTATGGCACTCCACCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCTATTCCTCCGGGATCTTATCCTTTCAGTCCTTTTGCCATGGCTTCTCCAAATGGTATTGCAGATGCTTCGGGAAATGCCCCAGGCCGCATCGAAGTTGGTGGTAAACCTCCTGAAGTGAAGGAAAAATTACCTATCAAAAGATCAAAAGGAAGTGCTAGTGGTGGTAATTTGAATATGTGGATTACAGGGAAAAATAATGAACCTGGTAAAATACCAGGAGAATCTGCTAATGGGATTCATTCCAAAAGTGGTGAGAGTGCAAGTGACGGAACTAGTGAAGGAAGTGATGAGAACTCCCAGAATGATTCTCAATTGAAATCAAGGGAGAGGCAGGACTCTTTTGAAGATGAACCATCTCAAAATGGAAGTTCAGTACATGCTCCTCAAAATGGGGTACATAATAGACCTCAGACAGTTGTTAATCAAACTATGTCTATCTTACCTATATCTACCACAAGTGCTCCTGGAGCAGTTCCTGGTCCCACAACTAATTTAAATATAGGAATGGATTATTGGGGCACACCAACTTCGTCCACCATTCCTGCATTGCATGGAAAGGTTCCTTCTACTGCAGTTGCTGGAGGGATGATTGCTGCTGGATCACGAGATGGTGTTCAGTCACAAGTTTGGCTGCAGGACGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATCGGGAATCTGCACGCAGATCCAGGTTACGGAAGCAGGCTGAATGTGATGAACTAGCTCAGCGTGCTGAAGCTTTGAAAGAAGAAAATGCCACTCTCCGATCAGAAGTGAGCCAGATCAGGAGTGAGTATGAGCAGCTACGTTCTGAGAATGCTGCCCTCAAGGAGAGACTTGGGGACATACCTGGTGTCGCGACGCCTGGGAAGGAGGATCTTAGGTCTGGTCAGAATGATCAGCATGTGAGTAATGACACTCAACAGAGTGGTCAGACAGAGGTTGTGCAGGGTGTTCATTAG 1254 0.4625 MGSSDMDKTPKEKESKTPPATSQEQSSTTAMPTTNPDWSNFQTYSPIPPHGFLASSPQAHPYMWGVQHYMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMASPNGIADASGNAPGRIEVGGKPPEVKEKLPIKRSKGSASGGNLNMWITGKNNEPGKIPGESANGIHSKSGESASDGTSEGSDENSQNDSQLKSRERQDSFEDEPSQNGSSVHAPQNGVHNRPQTVVNQTMSILPISTTSAPGAVPGPTTNLNIGMDYWGTPTSSTIPALHGKVPSTAVAGGMIAAGSRDGVQSQVWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATLRSEVSQIRSEYEQLRSENAALKERLGDIPGVATPGKEDLRSGQNDQHVSNDTQQSGQTEVVQGVH 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02480 417 Coils Coil 328 376 - -
Gma08g02480 417 CDD bZIP_plant_GBF1 313 363 IPR045314 GO:0003700|GO:0006355
Gma08g02480 417 Gene3D - 311 365 - -
Gma08g02480 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 310 373 IPR004827 GO:0003700|GO:0006355
Gma08g02480 417 MobiDBLite consensus disorder prediction 374 417 - -
Gma08g02480 417 MobiDBLite consensus disorder prediction 397 417 - -
Gma08g02480 417 MobiDBLite consensus disorder prediction 310 334 - -
Gma08g02480 417 MobiDBLite consensus disorder prediction 1 43 - -
Gma08g02480 417 SMART brlzneu 308 372 IPR004827 GO:0003700|GO:0006355
Gma08g02480 417 MobiDBLite consensus disorder prediction 173 195 - -
Gma08g02480 417 MobiDBLite consensus disorder prediction 1 18 - -
Gma08g02480 417 MobiDBLite consensus disorder prediction 119 229 - -
Gma08g02480 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 315 330 IPR004827 GO:0003700|GO:0006355
Gma08g02480 417 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 417 - -
Gma08g02480 417 MobiDBLite consensus disorder prediction 19 43 - -
Gma08g02480 417 MobiDBLite consensus disorder prediction 196 210 - -
Gma08g02480 417 MobiDBLite consensus disorder prediction 211 229 - -
Gma08g02480 417 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 417 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma08g02480 417 Pfam Disordered region downstream of MFMR 135 275 - -
Gma08g02480 417 SUPERFAMILY Leucine zipper domain 311 368 IPR046347 GO:0003700|GO:0006355
Gma08g02480 417 Pfam bZIP transcription factor 308 370 IPR004827 GO:0003700|GO:0006355
Gma08g02480 417 Pfam G-box binding protein MFMR 1 96 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02480 Gma-Chr8 34009080 34015599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02480 1 411 bZIP Transcription Factor Family AT2G35530 60.476 1.36e-158 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma08g02480 MFMR_assoc 1.6e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02480 K09060 - gmx:100101912 843.573