Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02473 ATGGAGAAACTGAAAGTGTCTGCTAAGAATGATCCTGCTGGCAGCAGTGATCAGGCAGATTCATTTCCAATATTCGAACTGTGGGAGAGTGAAAATGTTGGACAGAAGAGCAGTAGAAGAGACGAAGATGATACAAAAGCTGTAAGATTGGATGGAGATTCTGTAATTGCTCCCTCTAATTCTGCAAACAACAGTAAGGAACCTGTCAACAAGTGGATGGCATTTGCTAAGAAGCCTGGTTTCACAGTTGATGGCAACTCAGCAACAAAGGATAAAAGTAAAACCGAAGACAATTACTCGAGGAATCATCTAAAAGAGAAGCCGTCTTCTGGTCAAAATTTTTTAAGCGAAGCAACCATAGCCGAGAGAACTGCTGAATGGGGTCTTGCGGTGGACTCAGGGAATTTTAAAGCATTAGGGGGAGAGAATACAAGTGGTGGCTCTTTTGATGGTGACAAAAGCAGAAACTTGTCAGATAGATTTGTTGAATCAACACGGACGTCTGGGGAGTCAAATTACGGGTCTGAGTCATCATTAGGGGTGTTTCCAAGGGTGTCACAAGAGTTGAAGGAAGCACTGGCAACGCTGCAACAGACATTTGTTGTCTCAGATGCAACAAAACCAGACTGCCCTATCATGTATGCCAGCAGTGGCTTTTTTACTATGACTGGCTATTCTTCAAAAGAGATTATTGGAAGGAATTGTCGATTTCTTCAGGGGCCTGAGACCGACAAGAATGAAGTGGCCAAAATTCGGGATGCAACTAGAAATGGAAGAAGTTATTGTGGCAGACTTTTAAACTACAAGAAAGATGGAACTCCATTCTGGAATCTTCTCACTGTCACCCCCATCAAAGATGACCATGGCAATACTATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAGTACACAGAAGGCATGAATGAAAAGGCATTACGACCAAATGGATTACCTAAATCATTAATTCGTTATGATGCTCGTCAAAAGGAGAAAGCTTTGGGTTCCATCACTGAGGTTGTCCAAACTGTTAAGGACCCAAAATCCATTATTAATGATAGGAATGGTGATACTGCTACCATGCCTGAAGAGCAAGAGAAATTCAATTTTGATTTTGTTTTGCCAAAGTCTGCTGATATTGGGAATACAAGCACACCTGGTAGACAAGCTTCTCCACTGAATATCCAACGCATGAGTTCTAGTCAAGATAAGAGCAAGACATCATCACGATCAGGACGGATTTCTTTCAAGGGTTTAAAAGGGAGATCTCCGAGTTCTGCAGAGGAGAAGCCAATATTTGAACCTGAGGTTTTGATGACTAAGGAAATAGAGTGGTCTAACAATTTGGAGCATTCACTAAGAGAGAGGGACATAAGGCAGGGAATTGATCTAGCAACCACATTGGAGAGGATAGAAAAGAACTTTGTGATTTCTGATCCCAGACTTCCAGATAACCCAATAATATTTGCATCTGATAGCTTTCTTGAACTTACGGAATATACACGAGAAGAAATTTTGGGACGAAATTGTCGGTTTCTTCAAGGACCAGAAACAGATCAGGCAACTGTTTCCAGGATAAGGGATGCTATCAGAGAACAAAGGGAAATCACTGTACAGTTGATAAACTATACTAAGAGTGGGAAAAAGTTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAACTAGATGGAAGTGATCATGTAGAACCCTTAAAAAACCGCCTGTCTGAGACAACTGAGCAACAAAGTGCTAAGTTGGTGAAAGCCACTGCAGAAAATGTTGATGAAGCTGTCCGAGAACTTCCAGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCCCAACCTGTCTTTCCACGACCTCACAAAAAGGACAATCCTTCTTGGATAGCAATACAAAAGGTAGCTGCAAGAGATGAAAAAATTGGCCTGCAACATTTTGTGCCCATAAGGCCGTTGGGTTGTGGAGACACTGGCAGTGTTCATTTGGTGGAGCTCAAAGGTACGGGTGAACTATATGCAATGAAGGCAATGGAAAAGTCCGTAATGCTAAATCGTAATAAGGTTCACCGATCATGCATTGAGAGAGAGATTATATCATTATTGGATCATCCTTTTCTTCCAACACTATACACCTCATTTCAGACTCCTACACATGTATGTTTGATTACTGACTTCTTCCCTGGGGGAGAGTTGTTTGCCTTGCTTGACAAGCAACCGATGAAGATTTTCAAAGAAGAATTAGCAAGATTCTATGCGGCAGAGGTTGTCATCGGTTTGGAATATCTCCACTGTTTAGGTATAATTTACCGTGACTTAAAGCCTGAAAATATCTTACTTCAGAAGGATGGTCATGTTGTGTTAGCTGATTTTGATCTATCATTTATGACATCTTGTAAACCCCAGGTTGTGAAGCAAGCAGTACCTGGTAAAAGAAGATCACGAAGTGAACCACCACCAACATTTGTTGCAGAGCCAGTTACACAATCAAACTCATTTGTTGGAACTGAAGAATACATTGCTCCCGAAATTATAACTGGAGCTGGGCATACTAGCGGTATAGATTGGTGGACCCTTGGTATCTTGTTGTATGAGATGCTCTATGGTCGTACACCATTCAGAGGAAAGAATAGACAGAAGACATTTTCCAATATTTTACACAAGGATCTTACCTTTCCAAGCAGCATTCCGGCTAGTCTTGCGGCCAGGCAGTTGATTAATGCACTACTGCAAAGAGACCCAACAAGTCGTATAGGTTCAACCACTGGTGCCAATGAAATCAAACAGCATCCTTTTTTTCGTGGAATCAATTGGCCTCTTATCCGCAACATGACTCCACCTCCATTAGATGTTCCTCTTAAATTGATAGGAAACGATCCAGTGGCAAAGGATATAAAGTGGGAAGATGATGGAGTGCTAGTTAGCTCGATTGATATGGATATTTTTTGA 2991 0.4149 MEKLKVSAKNDPAGSSDQADSFPIFELWESENVGQKSSRRDEDDTKAVRLDGDSVIAPSNSANNSKEPVNKWMAFAKKPGFTVDGNSATKDKSKTEDNYSRNHLKEKPSSGQNFLSEATIAERTAEWGLAVDSGNFKALGGENTSGGSFDGDKSRNLSDRFVESTRTSGESNYGSESSLGVFPRVSQELKEALATLQQTFVVSDATKPDCPIMYASSGFFTMTGYSSKEIIGRNCRFLQGPETDKNEVAKIRDATRNGRSYCGRLLNYKKDGTPFWNLLTVTPIKDDHGNTIKFIGMQVEVSKYTEGMNEKALRPNGLPKSLIRYDARQKEKALGSITEVVQTVKDPKSIINDRNGDTATMPEEQEKFNFDFVLPKSADIGNTSTPGRQASPLNIQRMSSSQDKSKTSSRSGRISFKGLKGRSPSSAEEKPIFEPEVLMTKEIEWSNNLEHSLRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVSRIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLKNRLSETTEQQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKDNPSWIAIQKVAARDEKIGLQHFVPIRPLGCGDTGSVHLVELKGTGELYAMKAMEKSVMLNRNKVHRSCIEREIISLLDHPFLPTLYTSFQTPTHVCLITDFFPGGELFALLDKQPMKIFKEELARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLADFDLSFMTSCKPQVVKQAVPGKRRSRSEPPPTFVAEPVTQSNSFVGTEEYIAPEIITGAGHTSGIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPTSRIGSTTGANEIKQHPFFRGINWPLIRNMTPPPLDVPLKLIGNDPVAKDIKWEDDGVLVSSIDMDIF 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02473 996 Gene3D Phosphorylase Kinase; domain 1 660 744 - -
Gma08g02473 996 CDD STKc_phototropin_like 659 970 - -
Gma08g02473 996 MobiDBLite consensus disorder prediction 379 432 - -
Gma08g02473 996 Pfam Protein kinase domain 664 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02473 996 Gene3D Transferase(Phosphotransferase) domain 1 745 962 - -
Gma08g02473 996 MobiDBLite consensus disorder prediction 89 104 - -
Gma08g02473 996 SMART serkin_6 661 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02473 996 ProSiteProfiles PAC domain profile. 259 313 IPR000700 -
Gma08g02473 996 ProSiteProfiles PAS repeat profile. 460 533 IPR000014 -
Gma08g02473 996 TIGRFAM sensory_box: PAS domain S-box protein 211 302 IPR000014 -
Gma08g02473 996 TIGRFAM sensory_box: PAS domain S-box protein 486 577 IPR000014 -
Gma08g02473 996 SUPERFAMILY Protein kinase-like (PK-like) 639 973 IPR011009 -
Gma08g02473 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Gma08g02473 996 ProSitePatterns Protein kinases ATP-binding region signature. 667 690 IPR017441 GO:0005524
Gma08g02473 996 MobiDBLite consensus disorder prediction 1 111 - -
Gma08g02473 996 SUPERFAMILY PYP-like sensor domain (PAS domain) 479 575 IPR035965 -
Gma08g02473 996 Gene3D PAS domain 199 359 - -
Gma08g02473 996 MobiDBLite consensus disorder prediction 33 50 - -
Gma08g02473 996 CDD PAS 483 575 IPR000014 -
Gma08g02473 996 PANTHER FLIPPASE KINASE 1-RELATED 138 995 - -
Gma08g02473 996 Gene3D PAS domain 450 613 - -
Gma08g02473 996 Pfam PAS domain 483 575 IPR000014 -
Gma08g02473 996 Pfam PAS domain 206 302 IPR000014 -
Gma08g02473 996 ProSiteProfiles Protein kinase domain profile. 661 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02473 996 CDD PAS 212 301 IPR000014 -
Gma08g02473 996 PANTHER BNAA02G07840D PROTEIN 138 995 - -
Gma08g02473 996 SMART pac_2 537 579 IPR001610 -
Gma08g02473 996 SMART pac_2 262 304 IPR001610 -
Gma08g02473 996 MobiDBLite consensus disorder prediction 379 414 - -
Gma08g02473 996 ProSiteProfiles PAS repeat profile. 185 258 IPR000014 -
Gma08g02473 996 ProSiteProfiles PAC domain profile. 534 588 IPR000700 -
Gma08g02473 996 SUPERFAMILY PYP-like sensor domain (PAS domain) 206 298 IPR035965 -
Gma08g02473 996 SMART pas_2 462 531 IPR000014 -
Gma08g02473 996 SMART pas_2 187 256 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02473 Gma-Chr8 32763227 32822492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02473 68 995 AGC Kinase Gene Family AT5G58140 70.688 0.0 1311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma08g02473 Pkinase 1.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02473 K20715 - gmx:100820096 1993.78