Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02425 ATGGTTGTCTTTTTTTGGTGTCTGTCATTGGTACAATTTCACATGCTCAACTTAGAAGTTATAAAGCCAATCACAGGGGCATCAATGAATCCAGCAAGAAGCTTAGGGCCTGCTATTGTGCACAATGAGTACAAAGGAATATGGATATATTTGGTGTCACCAACTCTTGGAGTTGTGGCTGGTACTTGGGCCTATAATTTCATCAGGTACACAAATAAGCCAGTGCATGAAATCACCAAGAGTGCCTCTTTCCTCAAAGGTGGTGAAGCTAAGTGA 276 0.4167 MVVFFWCLSLVQFHMLNLEVIKPITGASMNPARSLGPAIVHNEYKGIWIYLVSPTLGVVAGTWAYNFIRYTNKPVHEITKSASFLKGGEAK 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02425 91 PRINTS Major intrinsic protein family signature 11 33 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g02425 91 PRINTS Major intrinsic protein family signature 48 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g02425 91 PANTHER AQUAPORIN NIP2-1 15 87 IPR034294 -
Gma08g02425 91 Pfam Major intrinsic protein 16 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma08g02425 91 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 15 87 - -
Gma08g02425 91 SUPERFAMILY Aquaporin-like 15 80 IPR023271 -
Gma08g02425 91 Gene3D Glycerol uptake facilitator protein. 1 81 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02425 Gma-Chr8 24468725 24469553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02425 15 86 Major Intrinsic Protein MIP AT5G37820 63.889 2.07e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02425 K09874 - gmx:100786924 142.51