Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02422 ATGATTTACACGAAAGAGATGAAGGAGAGCTTGAGTGGACAGGACAACCGCAATGCATTTATGAACCTTATTTTGGGGAAGGATCATGGTCTTTTCTACATCAAAAATCTCTTTATCGAGGAATTGGCCTGGATTGACCGTTTACACAAAAATGCTTGGATTGGATTTCAGTCGTGGAGAGCAATAACAAGGAAGGTGCAAAAGGGATCGAGAAGCATGCTGCGCAACTGTGTTCTAGCAAAAGACTGTGACCAGCCTGACTATGTTAAATTGGCTAAGGCCCTTTGTGTAAAGCACAATGTTAGCTTGTTGACAGTTCCATGTGCAAAGACCCTTGGAGAATGGGCTGGTTTGTGCAAGATTGATTCGGAAGGAAAAGCTAGGAAGGTTACTCGTTGCTCCTGCAATTGTGCAACAATGACAACAAGCTTGCATCAGTTGAGGCTCATGTTCTTCTTGCTCCATGAGTAA 471 0.4331 MIYTKEMKESLSGQDNRNAFMNLILGKDHGLFYIKNLFIEELAWIDRLHKNAWIGFQSWRAITRKVQKGSRSMLRNCVLAKDCDQPDYVKLAKALCVKHNVSLLTVPCAKTLGEWAGLCKIDSEGKARKVTRCSCNCATMTTSLHQLRLMFFLLHE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02422 156 Gene3D - 45 151 IPR029064 -
Gma08g02422 156 PANTHER 40S RIBOSOMAL PROTEIN S12 30 153 IPR000530 GO:0003735|GO:0005840|GO:0006412
Gma08g02422 156 PANTHER 40S RIBOSOMAL PROTEIN S12 30 153 - -
Gma08g02422 156 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 75 137 IPR004038 -
Gma08g02422 156 SUPERFAMILY L30e-like 62 135 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02422 Gma-Chr8 24246200 24249328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02422 77 135 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 79.661 6.22e-30 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02422 K02951 - gmx:100800815 259.225