Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02411 ATGGCAGATGGTGTTGTTGCCTTTCTGCTGCAGAACTTGTCACGGCTTCTTGAGGATGAACTAAAACTGTTTTCTGGCGTGGAGGACAAAATCAGTTCGCTGTGCAATGAGCTCAAGTTTATAGACATCTTCCTCAAGAGCTCTGAGGGGAAGTCCAACGACAAAGTTGTGAAAGAAGTGGTGAGCCAAATAAGAGATGCTGCCTACAAAGCTGAGGATGTGGTTGACACTTACATTGCCAACATCACCAAACACAGAACCAGAAACACACTGAGCATGTTATTCCACTTCAAAGAACGGTTCATGGTGCTGCACAAAGTCGACGCCGAGATAGAAAAAATCAAGATCTGTATTGATGAGATTTACAAGAACAAGGAGAGGTATGGCATCAGAGAAAGTGAATACAAAAGCGAAGAAGAAGAAGCTGAAACACTCCGCAAGAGAAGGAGAGATGTGGAGGAAGAAGATGTAGTGGGCTTAGTGCATGACTCAAGTGTGGTAATTAAGCAACTCACCATGGAAAGTGATTCATGTCGTAAAGTTGTTTCCATAATTGGAATGGGAGGGTTGGGTAAGACCACTCTTGCCAGAAAGATCTATAACAACAATCAGGTGAGTGAATTGTTTACTTGTCGTGCATGGGGTTATGTGTCCAATGATTATAGAGCTAGAGAGCTTTTGCTGAGCCTTCTCAAGTGTTTGCTGTCCACGGATGAATATAATGATTTGTTCAAGAAAAGAATGGATGGAGGAGGCGAAGATATAAGTGAGGAAGAATTGAAGAAGAAGGTAGCAGAATGGTTGAAGGGGAAAAAGTACCTGGTAGTGCTTGATGACATCTGGGAAACACAAGTATGGGATGAGGTTAAAGGCGCCTTTCCAGATGACCAAAGAGGTAGCAGAATACTAATAACAAGTCGCGACAAGGAGGTGGCATACTATATAGGAACAAAGTCTCCCTACTACCTTCCCTTCCTTAATAAAGGCGAAAGTTGGGAACTGTTCTCTAAGAAGGTGTTTCGAGGACTTGTTGCCAGGAAGGAGAAATCAGAAAGAGAGTGGAAGAGAATCAAGGAAGTGAGTTGGCATCTTACACAAGAAAAGACTCAAGTGATGGATATACTGAAGCTGAGCTATGACAGCTTGCCTCAAAGATTAAAGCCATGCTTTCTGTATTTTGGAATCTATCCCGAAGACTATGAGATCAGTGCAAGGCAATTGATCCAACTATGGACAGCTGAAGGGTTCATACATCCACAAAAACCTGGAATCCTGAGTACAGCAGAGATAGAAGATGTTGGTGACTACTACTTGGATGAGCTGGTGGATCGCAGCCTGGTGCAAGTGGCGAGTAGGAGGAGTGATGGTGGTGTCAAGACATGTCGGATTCACGATCTTCTTCGTGACCTCTGCATATCAGAGAGCAAATCCTGTAAGTTTTTGGAGGTTTGCACGGAGGTAAACATTGATACTCTATCCTTGAGCAATCCTCGTAGATTGTCCTTGCAATGCAAAGCACGGCCTAATATCTGTACAAAAAAATTTAATCAATCATACACTCGTTCCTTGTTCTTCTTTTCTGAAATTATGCACACACGTGGCATTCCAAAGAGCATCAAGAATGCTCGTGTGCTGTATTCAAAATCCAAAGGAGCAATGAATTACTCACTGCATAGTACTTTTAAGACGATGATCCATCTAAGGTATTTGAGAATAGACACAGGTGTCAGCCACATTCCAGCTTCTATAGGCAACCTTAGGAATTTAGAAACGCTAGATGTAAGATACAAAGAGACTGTCTCCAGTGAAATTTGGAAGTTGAAGCAACTGAGGCATCTTTATTTGAGAGGGGGTGCAAAATTGCCAGAAGTAGCTAGAGAAAGAAAGGTGAATCTTCAAACTCTGTGGTTAAGGGCTTTTGATCGACAAATGGTGTCCATGATGAACAAGGACATGTATGTCAATGACATATTTCCCAGGTTGAGAAAATTAGTTTTGCACTATCCATTTCATCGTCCTTCTCACGAACAATTACCAACTGTAAGGTTACCAAGTCTACACCACCTATGCAATCTCCATAGCCTAAAAATAATTGACTTTCTAGAACTTCCACCTGACAAAAATGCCTTTCCATCACATCTCACCAAGATAACCTGGAAACAAATACATGTCGGCAGTGACTTCTCTTTGATGAGTACTTTAGGATGGCTAACCAACCTACAAATTTTGAAAATGGGAAGGCAATGCTCTGACGTGTTGTTCGACCTTAATGTTGGTGCAGGAGAGTTCCCACAGCTTCAAGTATTTCAGATGAGGGGAATGAAACTCAGAAGCTGGAGATTGGACAAAAGTGCAATGCCACATCTTCAACATCTGCTCATTGAAGGCTGTGAATACTTGAATGATCTTCCTGAAGAATTGATGCCTGAAACAGGATCATTCACTAAAGAATATCGTTAG 2460 0.4199 MADGVVAFLLQNLSRLLEDELKLFSGVEDKISSLCNELKFIDIFLKSSEGKSNDKVVKEVVSQIRDAAYKAEDVVDTYIANITKHRTRNTLSMLFHFKERFMVLHKVDAEIEKIKICIDEIYKNKERYGIRESEYKSEEEEAETLRKRRRDVEEEDVVGLVHDSSVVIKQLTMESDSCRKVVSIIGMGGLGKTTLARKIYNNNQVSELFTCRAWGYVSNDYRARELLLSLLKCLLSTDEYNDLFKKRMDGGGEDISEEELKKKVAEWLKGKKYLVVLDDIWETQVWDEVKGAFPDDQRGSRILITSRDKEVAYYIGTKSPYYLPFLNKGESWELFSKKVFRGLVARKEKSEREWKRIKEVSWHLTQEKTQVMDILKLSYDSLPQRLKPCFLYFGIYPEDYEISARQLIQLWTAEGFIHPQKPGILSTAEIEDVGDYYLDELVDRSLVQVASRRSDGGVKTCRIHDLLRDLCISESKSCKFLEVCTEVNIDTLSLSNPRRLSLQCKARPNICTKKFNQSYTRSLFFFSEIMHTRGIPKSIKNARVLYSKSKGAMNYSLHSTFKTMIHLRYLRIDTGVSHIPASIGNLRNLETLDVRYKETVSSEIWKLKQLRHLYLRGGAKLPEVARERKVNLQTLWLRAFDRQMVSMMNKDMYVNDIFPRLRKLVLHYPFHRPSHEQLPTVRLPSLHHLCNLHSLKIIDFLELPPDKNAFPSHLTKITWKQIHVGSDFSLMSTLGWLTNLQILKMGRQCSDVLFDLNVGAGEFPQLQVFQMRGMKLRSWRLDKSAMPHLQHLLIEGCEYLNDLPEELMPETGSFTKEYR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02411 819 Gene3D - 5 122 - -
Gma08g02411 819 PRINTS Disease resistance protein signature 267 281 - -
Gma08g02411 819 PRINTS Disease resistance protein signature 181 196 - -
Gma08g02411 819 PRINTS Disease resistance protein signature 584 600 - -
Gma08g02411 819 Gene3D - 146 319 IPR027417 -
Gma08g02411 819 CDD RX-CC_like 2 121 IPR038005 -
Gma08g02411 819 Gene3D - 373 475 IPR036388 -
Gma08g02411 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 393 IPR027417 -
Gma08g02411 819 Coils Coil 135 155 - -
Gma08g02411 819 PANTHER - 39 805 - -
Gma08g02411 819 SUPERFAMILY L domain-like 453 806 - -
Gma08g02411 819 Gene3D Ribonuclease Inhibitor 528 816 IPR032675 -
Gma08g02411 819 Pfam Rx N-terminal domain 5 89 IPR041118 -
Gma08g02411 819 PANTHER DISEASE RESISTANCE PROTEIN RP 39 805 IPR044974 GO:0006952
Gma08g02411 819 Pfam NB-ARC domain 167 352 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02411 Gma-Chr8 23933008 23935994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02411 180 470 WRKY Transcription Factor Family AT5G45050 26.101 2.81e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02411 - - gmx:100801950 1572.76