Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02399 ATGTGTTCTCTACTTTGGAGTTCCATTGCATTGTGTGTAGCTTTCCTACTCCTTGAGCTTGGCGTTGTGCACCCTTCACCCTCACACCATAGGATCACTCGCTTGCCGGGTCAACCCCATGTTCAGTTTCATCAGTTTTCAGGTTATGTAACCGTTGATGACAAAAACCAGCGTGCACTTTTTTTCTACTTTGCTGAAGCCGAAAAAGATGCACTTTCCAAGCCCCTTGTTCTGTGGCTCAATGGAGGGCCTGGTTGTTCTTCTCTTGGAGTTGGTGCATTTTCAGAGAATGGACCATTTAGGCCCAAAGGTAAGGGCTTGGTTAGAAACCAATTCAGCTGGAACAGAGAAGCGAATATGCTCTATTTGGAAACGCCAATTGGAGTTGGATTCTCTTACTCAACTGATACTTCCTCTTATGAGGGTGTGAATGACAAAATTACGGCCAGGGATAACTTGGTGTTCTTGCAAAGCTGGTTTATAAAGTTCCCAGAATACAGAAACCGAAGTTTGTTCATTGTAGGAGAAAGCTATGCAGGTCATTATGTTCCTCAGCTGGCTGAACTTATGCTCCAATTCAACAAAAAGGAGAAGTTATTCAATTTAAAAGGCATTGCTCTTGGTAATCCAGTTCTAGAATTTGCAACAGATTTCAATTCGAGAGCTGAGTTCTTCTGGTCACATGGATTAATTTCAGATACAACGTACAAAATGTTCACTTCTGTTTGTAACTATTCAACATATGTGAGGGAATACTATAATGGTGCTGTTTCTCCTATCTGTTCAAGTGTTATGAGCCAAGTTACTACGGAAACAAGTAGATTTGTTGACAAATATGATGTGACCCTTGATGTTTGTTTATCTTCAGTGTTCTCACAAACCAAAGTCCTCAATCCCCAGCAAGTAACTGAAACCATAGATGTATGTGTGGAAGATGAAACAGTCAATTATCTGAACAGGAAAGATGTGCAGTCAGCTATGCATGCACATCTTGTTGGAGTTCAAAGATGGTCTGCTTGCAGCAATGTCCTGGATTATGAGCTGCGTGACTTGGAGATACCAACAATCACGGTTGTGGGGAAGCTAGTCAAGGAGGGAATACCAGTATTGGTTTACAGTGGTGATCAGGATTCAGTTATCCCACTGACTGGAAGTAGAACACTAGTACATAAATTGGCAAAAGAACTTGGATTGAACACCACTGTGCCATACAGGGTGTGGTTTGAGAAGCAGCAGGTGGGTGGGTGGACTCAAGTTTATGGTAACATCCTTTCATTTGCCACCATCAGAGGAGCATCACATGAAGCTCCATTTTCACAGCCTGAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAAGGAGGACCACTACCACAAGAGTTTTGA 1386 0.4242 MCSLLWSSIALCVAFLLLELGVVHPSPSHHRITRLPGQPHVQFHQFSGYVTVDDKNQRALFFYFAEAEKDALSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGKGLVRNQFSWNREANMLYLETPIGVGFSYSTDTSSYEGVNDKITARDNLVFLQSWFIKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDTTYKMFTSVCNYSTYVREYYNGAVSPICSSVMSQVTTETSRFVDKYDVTLDVCLSSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSAMHAHLVGVQRWSACSNVLDYELRDLEIPTITVVGKLVKEGIPVLVYSGDQDSVIPLTGSRTLVHKLAKELGLNTTVPYRVWFEKQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEGGPLPQEF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02399 461 PANTHER CARBOXYPEPTIDASE 6 459 - -
Gma08g02399 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 459 IPR001563 GO:0004185|GO:0006508
Gma08g02399 461 Gene3D - 356 454 - -
Gma08g02399 461 Gene3D alpha/beta hydrolase 27 288 IPR029058 -
Gma08g02399 461 Gene3D - 309 345 - -
Gma08g02399 461 Pfam Serine carboxypeptidase 37 454 IPR001563 GO:0004185|GO:0006508
Gma08g02399 461 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Gma08g02399 461 SUPERFAMILY alpha/beta-Hydrolases 32 457 IPR029058 -
Gma08g02399 461 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Gma08g02399 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Gma08g02399 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Gma08g02399 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Gma08g02399 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02399 Gma-Chr8 23725760 23729355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02399 317 457 Calmodulin-binding Proteins AT2G22960 26.241 1.67e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02399 K16297 - gmx:100805130 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02548 18 59591495 59594775 Gma08g02399 08 23725760 23729355 GST