Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02386 ATGTTCCCTTCCACTAATTACACCTCCTCAGGCTCTTACCCTCGTTTCCCTTCTTCATCGTCTTCTTCCACTTCACCCTACCCTTCTTTTACTCTCCTTCATCCTGAAAATTCTTCTTCCAGCAACACCTTTCTTTGTGATCCACTTGCTCTTACCTACATACCCTCTCATTACCATGCTCCAATAATCCCAGAAACACTAGCCAATTGGGCTGTTGCAGATTGTGCAATACTGAATCAGGATCTCGGTGGTGTCCTTTATGGCATCACCAATAAACCAGAGAAGAAAGCAACCAAAAAAGATAGGCACAGCAAGATTCACACATCTCAGGGTTTGAGGGACAGAAGGGTGAGGTTGTCCATTGAGATCGCACGCAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCCAGCAACACCCTTGACTGGCTCTTCACAAAGTCCAAGAAGGCAATCAAGGAGCTTACTCGAAGCAAGCACAGTGCTGATAGCTTCGAATTCTCCTCATCTTCGGATGGTGAAGTGGTTTCTACCATCCACCAAGACCTACACCAACAACAAGGGGTAGATTTGGAAGAGGGAAAGTTGAAAGAACCTGCAGCTTATTGTGTTAAAGCAAAGATGAAGGAATCTAGGGAAAAAGCAAGGGCAAGAGCAAGGCAAAGGACTAGTAGCAAGGTATTGTGCAACATAAGTGGCGAAGGGAAGGTGCAAGACTTGAAGAAAAAATGCCCTGCAACTGAAAACCCTCAAATCCTGAACCAATTAAGGTCACCCCTTCAGCCTCCTCATCCTCAAGATGTGGGTGGAGAAGTGCCAAGAGATGATGACTTCAATGTTATTGAGGAATCCATTGTCATCAGAAGAAAGTTGAAACACACTTTGATGTCTTCCATTCATCACCAAAACGCTGTGATCCCTAAGGAAGCAAGTGTAAACAACAGTGACTACCACTCCTTCCCCAATCTGTCTCCAAATTGGGAAGCTAATAATAATGGTGCTAATGGACGCTCCACCTTTTGTGCAATAGCCAGCATGAATCTATCTACAGGGCTTCAAATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTCATCCAAGCTAA 1113 0.4447 MFPSTNYTSSGSYPRFPSSSSSSTSPYPSFTLLHPENSSSSNTFLCDPLALTYIPSHYHAPIIPETLANWAVADCAILNQDLGGVLYGITNKPEKKATKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSADSFEFSSSSDGEVVSTIHQDLHQQQGVDLEEGKLKEPAAYCVKAKMKESREKARARARQRTSSKVLCNISGEGKVQDLKKKCPATENPQILNQLRSPLQPPHPQDVGGEVPRDDDFNVIEESIVIRRKLKHTLMSSIHHQNAVIPKEASVNNSDYHSFPNLSPNWEANNNGANGRSTFCAIASMNLSTGLQIFGKSWEECTNPHPS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02386 370 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Gma08g02386 370 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 369 IPR005333 GO:0003700
Gma08g02386 370 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 8 369 - -
Gma08g02386 370 Pfam TCP family transcription factor 98 228 IPR017887 -
Gma08g02386 370 ProSiteProfiles R domain profile. 211 228 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02386 Gma-Chr8 23459544 23460769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02386 55 332 TCP Transcription Factor Family AT1G67260 32.881 4.37e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma08g02386 TCP 1.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02386 - - gsj:114424268 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02386 08 23459544 23460769 Gma08g02386 08 23459544 23460769 ECH
Gma08g02386 08 23459544 23460769 Gma06g01901 06 21174280 21175422 ECH
Gma08g02386 08 23459544 23460769 Gma04g01459 04 36208683 36210461 ECH
Gma08g02386 08 23459544 23460769 Gma05g00126 05 1269972 1271469 ECH
Gma08g02386 08 23459544 23460769 Gma17g01138 17 9888355 9889863 ECH
Gma18g02536 18 59448496 59450095 Gma08g02386 08 23459544 23460769 GST