Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02385 ATGTTGCATAAGAAGAAGAATGGCAGCGAAAACGGCAACAACAAGGAGAACGAAGACACCACCATCACCGATGTCTTGAAGGTCGAAGCGCACTACGACGGTTGCGCTCTCCTTTATGGCATAGAAAGCTTTTATTTTGATGATAAGTTTAGATATCCTAAGAATTCTGCTCCTGGTCAACTCCCAAGAACAGTGGATGTAATTGCAGAAGACGACCTTGTTGATTTTTGCAAGCCTGGAGATCGAGTGGCAATTGTGGGGATATATAAGGCTCTTGCAAGGAAAAGGACTGTTCTCATAGCCAACAATGTTTCTCTTCTCAACAAAGAGGCTAATGTACCAATCTACAGTGTTGAAGATGTCAAAAACATTAAAGAGATAGCTGCAAGAGATGATGCATTTGATCTGCTAAGTAATTCACTTGCACCTTCTATATATGGGCATTCTTGGATAAAGAAAGCAGCGGTTTTGTTGATGCTTAGTGGGGTGGAGAAGAATTTAAAGAATGGCACTCACTTTGGCTTTTATTGTTCAATTCTACAGTATGATCCTTCATTAACTCCAACCAAAAATATCGGACTCCCAGACTCCTTGCTTTCTCGATTTGATCTACTTTTTATTGTGTTGGATCAAATGGATCCTGATATTGATCGTCGAATATCAGAGCATGTCCTTCGTGAGGCAGCACTTGATGGGAGCTCAAGATATGGAAGAGAAAATGAAGCTGATAAGGACTCATGGAACATTGTGGTTGAACATGATTATGCTGAGTGCACTGGATCTGCTATTCAAGCTTTAGTTTTGTTTAAGAAGCTATATCCAAGGCATAGGGAGACAGAGATAAAGAATTCCATTGCCAATGCAGTTCATGCGGCGGGTAAAACTTACACTGATTGTGTTGCCATTCGCAAAGCCGTTAAATTTCTACTTTCAACACAGAAAGAGGATGATCAACTTGATAACAATGACTTTGGTGGAAATAGCATTCCAGAATCTTATGGCAACATCTCAAAATTGTCAAAATTTAAGACTCCTAGACCATCAATGATCGAGTTCATAGCGGTGGCAGCACTACGGAAGTAG 1083 0.4044 MLHKKKNGSENGNNKENEDTTITDVLKVEAHYDGCALLYGIESFYFDDKFRYPKNSAPGQLPRTVDVIAEDDLVDFCKPGDRVAIVGIYKALARKRTVLIANNVSLLNKEANVPIYSVEDVKNIKEIAARDDAFDLLSNSLAPSIYGHSWIKKAAVLLMLSGVEKNLKNGTHFGFYCSILQYDPSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPDIDRRISEHVLREAALDGSSRYGRENEADKDSWNIVVEHDYAECTGSAIQALVLFKKLYPRHRETEIKNSIANAVHAAGKTYTDCVAIRKAVKFLLSTQKEDDQLDNNDFGGNSIPESYGNISKLSKFKTPRPSMIEFIAVAALRK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02385 360 SMART mcm 4 314 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma08g02385 360 Gene3D - 115 178 IPR027417 -
Gma08g02385 360 PANTHER DNA HELICASE 181 228 - -
Gma08g02385 360 PANTHER DNA HELICASE 52 173 - -
Gma08g02385 360 SUPERFAMILY Nucleic acid-binding proteins 53 95 IPR012340 -
Gma08g02385 360 Pfam MCM OB domain 54 91 IPR033762 -
Gma08g02385 360 ProSiteProfiles MCM family domain profile. 133 173 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma08g02385 360 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 243 316 IPR008930 -
Gma08g02385 360 Pfam MCM P-loop domain 181 226 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma08g02385 360 Pfam MCM P-loop domain 120 172 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma08g02385 360 Gene3D - 50 111 IPR012340 -
Gma08g02385 360 ProSiteProfiles MCM family domain profile. 181 224 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma08g02385 360 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 181 228 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma08g02385 360 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 52 173 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma08g02385 360 Gene3D - 179 306 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02385 Gma-Chr8 23438917 23448752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02385 132 247 Core DNA Replication Machinery Family AT5G46280 44.361 2.38e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02385 K02541 - gmx:100811545 219.164