Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02364 ATGGGGACTCCAAGAGGAATAGCTCTTCTCAGTTTCACATCCTTCTTGTTTTGGAGCTCAGCGAATGCTTTGCTTTCTCCTAAGGGAGTGAACTTTGAAGTGCAAGCTTTAATGGGCATAAAATATTCTCTAGAGGATCCACATGGTGTTCTAGATAATTGGGATGGGGATGCAGTTGATCCATGTAGCTGGACTATGGTCACATGTTCTTCTGAAAACTTGGTCATTGGACTGGGCACTCCTAGTCAAAGTTTATCTGGTACTCTATCTCCAAGCATAGGCAACTTAACCAACCTCCAGATTGTGCTTCTACAGAATAACAACATAAGTGGACCAATCCCTTCAGAGCTAGGCAAACTTCCTAAGCTTCAAACACTTGATCTCTCTAACAACTTCTTCAAAGGGGAGATTCCTCCCTCTCTTGGTCACCTGAGAAGCCTCCAATACCTGAGGCTCAATAATAACAGTCTTGTTGGTGAATGCCCAGAGTCACTGGCTAACATGACCCAGCTTAATTTTCTTGATTTGTCATACAATAATCTTAGTGACCCGGTGCCTAGAATTTTAGCCAAATCATTCAGCATTGTTGGAAACCCCCTTGTTTGTGCCACGGGAAAAGAGCCAAACTGCCATGGGATGACATTGATGCCTATGTCCATGAACTTAAACAACACTGAAGATGCTTTACAATCTGGCAGACCAAAAACTCATAAAATGGCAATTGCCTTTGGCTTGAGTTTGGGATGTCTTTGCCTCATAGTTATTGGTTTTGGACTTGTTCTTTGGTGGAGGCACAAACACAATCAACAAGCATTCTTTGATGTTAAAGACCGGCATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCAATTCAGAGAACTCCAGATTGCTACTAAAAACTTCAGCAGCAAAAACATACTGGGAAAAGGTGGTTTTGGAAATGTCTACAAAGGAATTCTCCCTGATGGCACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATTGGTGGAGAGATTCAATTTCAGACCGAAGTTGAAATGATCAGCCTGGCAGTGCACCGAAACCTCCTCAGACTGTATGGATTTTGCATGACACCATCGGAAAGGCTTTTGGTTTATCCATACATGTCCAATGGCAGTGTCGCTTCCCGTCTCAAGGGGAAGCCAGTGCTGGACTGGGGCACAAGGAAGCACATTGCTTTAGGAGCAGGAAGAGGACTACTTTACCTTCATGAGCAGTGTGATCCAAAGATAATCCATAGGGATGTGAAAGCTGCCAACATATTGCTTGATGACTATTATGAAGCTGTAGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCAAGATTCACATGTCACTACTGCAGTGAGGGGCACTGTTGGCCATATTGCACCAGAATACCTATCCACAGGACAATCCTCTGAGAAGACTGATGTCTTTGGATTTGGCATTCTCCTCCTTGAATTGATCACAGGCCAAAGGGCTCTAGAGTTTGGAAAATCAGCTAACAACAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCAGGAGAAAAAGCTAGAAATGCTAGTAGACAAAGATCTCAAGAGCAACTATGACAGGATTGAGTTTGAGGAAATGGTTCAAGTGGCTCTATTGTGTACTCAATATCTTCCCGGTCATAGGCCTAAAATGTCGGAAGTGGTACGCATGCTTGAAGGTGATGGACTAGCAGAAAGATGGGAAGCTTCTCAAAGAGTTGACACAACAAAGTGCAAACCACAAGAGTCCTCTTCATCAGATAGGTATTCTGATCTCACTGATGACTCTTTGTTGTTAGTCCAAGCCATGGAGCTCTCAGGACCCAGGTGA 1872 0.4354 MGTPRGIALLSFTSFLFWSSANALLSPKGVNFEVQALMGIKYSLEDPHGVLDNWDGDAVDPCSWTMVTCSSENLVIGLGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNISGPIPSELGKLPKLQTLDLSNNFFKGEIPPSLGHLRSLQYLRLNNNSLVGECPESLANMTQLNFLDLSYNNLSDPVPRILAKSFSIVGNPLVCATGKEPNCHGMTLMPMSMNLNNTEDALQSGRPKTHKMAIAFGLSLGCLCLIVIGFGLVLWWRHKHNQQAFFDVKDRHHEEVYLGNLKRFQFRELQIATKNFSSKNILGKGGFGNVYKGILPDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPSERLLVYPYMSNGSVASRLKGKPVLDWGTRKHIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANNKGAMLDWVKKIHQEKKLEMLVDKDLKSNYDRIEFEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRVDTTKCKPQESSSSDRYSDLTDDSLLLVQAMELSGPR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02364 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 623 - -
Gma08g02364 623 Pfam Leucine Rich repeats (2 copies) 97 137 IPR025875 -
Gma08g02364 623 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Gma08g02364 623 SMART serkin_6 303 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02364 623 Gene3D Transferase(Phosphotransferase) domain 1 380 592 - -
Gma08g02364 623 SMART LRR_typ_2 120 143 IPR003591 -
Gma08g02364 623 SMART LRR_typ_2 168 191 IPR003591 -
Gma08g02364 623 SMART LRR_typ_2 144 167 IPR003591 -
Gma08g02364 623 SMART LRR_typ_2 96 119 IPR003591 -
Gma08g02364 623 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Gma08g02364 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Gma08g02364 623 MobiDBLite consensus disorder prediction 590 606 - -
Gma08g02364 623 MobiDBLite consensus disorder prediction 583 606 - -
Gma08g02364 623 Pfam Protein kinase domain 304 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02364 623 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Gma08g02364 623 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 9 623 - -
Gma08g02364 623 SUPERFAMILY Protein kinase-like (PK-like) 280 573 IPR011009 -
Gma08g02364 623 SUPERFAMILY L domain-like 33 195 - -
Gma08g02364 623 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Gma08g02364 623 ProSiteProfiles Protein kinase domain profile. 303 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02364 Gma-Chr8 23120440 23124452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02364 8 623 Receptor kinase-like Gene Family AT5G16000 79.040 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gma08g02364 Pkinase 4.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02364 - - gmx:100798412 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02518 18 59266739 59270848 Gma08g02364 08 23120440 23124452 GST
Gma13g00354 13 15330292 15334380 Gma08g02364 08 23120440 23124452 PCT
Gma19g00368 19 5644164 5648005 Gma08g02364 08 23120440 23124452 PCT
Gma08g02364 08 23120440 23124452 Gma13g00354 13 15330292 15334380 PCT
Gma08g02364 08 23120440 23124452 Gma19g00368 19 5644164 5648005 PCT