Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02354 ATGCAGGCCAGGGAGATCACAGGACTCAATTATTTACTCCCTCCAGACCCTTGTTTCAACTACAGCATGGTTCAGAACACCATCCCCACATTTCAACTCCACAAACTCTCAAACCAATTCTATGGTTTGCAGAAACCTCCTCCTCAAGTGCTTGCAGACTTCAGCCCCCCTCAGTCCTCATGCATCAGCAGCAACTCAACCTCTGATGAAGCAGATGAGCAGCAGCAAAGCCTCATCAATGAGAGGAAGCACAGGAGGATGATATCGAACCGCGAATCGGCACGCCGGTCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTGTGGTCACAGGTGGTTTGGCTCAGGAATGAAAATCACCAGCTCATGGACAAGCTGAACCATGTGTCTGAGTCACATGATAAAGTTGCTCAAGAGAATGTTCAGCTGAGAGAAGAAGCCTCAGAACTTCGCCAAATGATATGTGACATGCAGCTACACAGTCCATACCACCCTCCTCCCTTGAGTCCCATTGATGATGATGTTTCTCCCTATGTCAAATCTGATTCCTCAATCACAGACTCTTTGGACCTGCTTGGTTGA 582 0.4845 MQAREITGLNYLLPPDPCFNYSMVQNTIPTFQLHKLSNQFYGLQKPPPQVLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQLHSPYHPPPLSPIDDDVSPYVKSDSSITDSLDLLG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02354 193 MobiDBLite consensus disorder prediction 47 78 - -
Gma08g02354 193 MobiDBLite consensus disorder prediction 161 193 - -
Gma08g02354 193 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Gma08g02354 193 MobiDBLite consensus disorder prediction 54 74 - -
Gma08g02354 193 PANTHER BZIP TRANSCRIPTION FACTOR 1 193 - -
Gma08g02354 193 Gene3D - 80 135 - -
Gma08g02354 193 MobiDBLite consensus disorder prediction 179 193 - -
Gma08g02354 193 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Gma08g02354 193 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 193 IPR044521 -
Gma08g02354 193 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Gma08g02354 193 Pfam bZIP transcription factor 82 139 IPR004827 GO:0003700|GO:0006355
Gma08g02354 193 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
Gma08g02354 193 Coils Coil 133 153 - -
Gma08g02354 193 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02354 Gma-Chr8 22976335 22977286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02354 40 177 bZIP Transcription Factor Family AT3G30530 63.830 1.45e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma08g02354 bZIP_1 4.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02354 - - gmx:100500497 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02510 18 59201077 59202031 Gma08g02354 08 22976335 22977286 GST
Gma13g00358 13 15423594 15424491 Gma08g02354 08 22976335 22977286 PCT
Gma19g00357 19 5415503 5416374 Gma08g02354 08 22976335 22977286 PCT
Gma08g02354 08 22976335 22977286 Gma13g00358 13 15423594 15424491 PCT
Gma08g02354 08 22976335 22977286 Gma19g00357 19 5415503 5416374 PCT