Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02334 ATGTATCTTACTTCACTCTTCCATGCATCAATAGGCAACTTGAAAGTTGAACCAGAGAATCTTCTTCTGGACTTAAATGGTGTTCTGAAAGTTACAGATTTTGGATTGAGTACATATGCGCAACAGGAGGATGAACTTCTTCGAACTGCTTGTGGAATTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTTATGTGGAGTCATCCTCTTTGTGCTTATGGCCGGGTATTTGCCCTTTGTTGAGCCAAATCATGCGAAACTGTACAAAAAAATTGGCAGGGCCCAATTTACATGTCCATCATGGTTTTCTCCTAAGGCAAAGAAACTATTGAAGCTTATTCTTGATCCAAACCCTCTAACAAGGATAAAAGTTCCTGAACTTTTAAAAGATGAATGGTTCAAAAAAGGATACAAACAAACAACTTTTATAATGGAAGAGGATATCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGGAAAATCTTGTGACGGAGAGAAAAGAGAAACCAGTGTCAATGAATGCTTTTGAGCACATATCTAGGTCACAAAGCTTCAACCTTGAAAATTTGTTTGAGAAGCAGCAAGGGTCTGTTAAGAGAGAAACACATTTTACCTCACAGCGCCCTACAAATGAAATCATGTCAAAAATTGAGGAAGTTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGCATCAACACTGTAATGCCCACTCAGCTGGTGAAAGTGACTTGAATGACTACAACCTTAGGTTGGTCCTCACAATTGCATTCCAATTTACCTTTGAGAACCATTTGCGGGACAATGTGACTGTTATGGCTCGCCAGCATGTGCATAATGTTGTGCGATCTATTCAGAGGGTTGCCATGGCAATTGCTCCCTCTAGGCTCAGTTCACAGTTGGGGTCAAAGTCACTTCCTGGTCCACCCGAGGCTCTTACCTTAGCGAGATGGATCTGCAAAAGCTACAGGTTTGCATTCTTCCGTAAGTCTATTTTTGTTATGATTAATGTAGTTTCCTCAATCATTTTATATCCTTGTCTTCAAGGTTATTTAAA 1109 0.3959 MYLTSLFHASIGNLKVEPENLLLDLNGVLKVTDFGLSTYAQQEDELLRTACGIPNYVAPEVLNDRGYVGSTSDIWLCGVILFVLMAGYLPFVEPNHAKLYKKIGRAQFTCPSWFSPKAKKLLKLILDPNPLTRIKVPELLKDEWFKKGYKQTTFIMEEDINVDDVAAAFNDSKENLVTERKEKPVSMNAFEHISRSQSFNLENLFEKQQGSVKRETHFTSQRPTNEIMSKIEEVAKPLGFNVHKRNYKHQHCNAHSAGESDLNDYNLRLVLTIAFQFTFENHLRDNVTVMARQHVHNVVRSIQRVAMAIAPSRLSSQLGSKSLPGPPEALTLARWICKSYRFAFFRKSIFVMINVVSSIILYPCLQGYL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02334 369 SUPERFAMILY Protein kinase-like (PK-like) 17 160 IPR011009 -
Gma08g02334 369 Pfam NAF domain 184 244 IPR004041 GO:0007165
Gma08g02334 369 CDD CIPK_C 188 246 - -
Gma08g02334 369 PANTHER - 14 259 - -
Gma08g02334 369 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 14 259 - -
Gma08g02334 369 Gene3D Kinase associated domain 1, KA1 181 273 - -
Gma08g02334 369 Gene3D Transferase(Phosphotransferase) domain 1 3 152 - -
Gma08g02334 369 SMART serkin_6 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02334 369 Pfam Protein kinase domain 16 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02334 369 ProSiteProfiles Protein kinase domain profile. 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02334 369 ProSiteProfiles NAF domain profile. 182 206 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02334 Gma-Chr8 22586945 22592336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02334 16 248 CBL-interacting serine-threonine protein kinases AT1G01140 68.220 1.22e-113 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma08g02334 Pkinase 1.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02334 - - gmx:106794280 471.085