Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02333 ATGCCTTTGTCTTCAGAAGTTGCAACTGCATCTGAAAGGCACCGCATAGGGTTGCTGAGAAGCCATGCATCCACTAAAGTCACCGATAAAGCGAAGCAAATACTCGATTCCAAATTTGGGCCTCTCAAAGACGACGATGATGGCGGCATCGAAGACTTCGACGATGGTAGCAAAATAGTGGAGCTCAACGCCATAGAAATCCTCACCGAGCACCTGCACTTCTACGAGAAAGGCTTCCTGTGCGACTCAAACCTCTGCATGCACATGCGCGCGCACGGAGAACAGTTCGAGACGATGGAGGCGATGGCAAAGCCTTCAGAGACCATTACGCAGTGGCGCGCAACGCGATTCTCGTGTCCGTTTGAAGGATGCAAACGGAACAAGCTCCACCAACGGTTTCAGTCGCTGAAATCAGTGATTTGCGTGAAGAACCACTTCAAGAGAAGCCACTGCCCAAAGATGTAG 465 0.5097 MPLSSEVATASERHRIGLLRSHASTKVTDKAKQILDSKFGPLKDDDDGGIEDFDDGSKIVELNAIEILTEHLHFYEKGFLCDSNLCMHMRAHGEQFETMEAMAKPSETITQWRATRFSCPFEGCKRNKLHQRFQSLKSVICVKNHFKRSHCPKM 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02333 154 PANTHER ZINC FINGER PROTEIN STOP1 HOMOLOG 30 154 - -
Gma08g02333 154 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 30 154 IPR044300 GO:0010044|GO:0010447
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02333 Gma-Chr8 22565660 22566793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02333 42 153 C2H2 Transcription Factor Family AT1G34370 48.760 2.87e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02333 - - gmx:100809135 206.453