Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02309 ATGAGGCTTGTCATATCTGCTGTATGTGTTATTGTGCTATTTTCTTATGCAGCCGCGTATGATCCTTTGGATCCAAATGGAAACATAACGATCAAATGGGATGTTGTGTCATGGACACCAGATGGCTATGTAGCCGTGGTAACAATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCTGGATGGACCTTGGGATGGACATGGGCAAAGAAGGAAGTTATATGGTCCATGGTAGGAGCTCAAACCACAGAACAAGGAGACTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTGCCTTACAACCAGCAATTCTCAAACTGTTGCAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGACCCTTCATCAGCAGTTTCATCCTTCCAAGTGAGTATTGGGTTAGCTGGTACTTCAAACAAGACAGTTAAACTCCCCAAGAACTTCACTCTCTTGGGTCCAGGACCAGGCTACACTTGTGGCCCTGCCAAGGTTGTTCCTTCCACCGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACTTGCACATACTCACAATTTCTGGCTAGAAAGAACCCGGGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAGACCATTACACCTTGCCCCACTTGTGCCTGTGGCTGCCAGAACAAGAGGAACTGTGTCAAGAGTAACTCTAAACGTATCAACATGGTGGGGATTCACACTCCAAAGAAAGACAATGAACCATTGCTACAATGCACTCATCATATGTGCCCAATAAGGGTACACTGGCACGTGAAGCTCAACTATAAGGACTATTGGCGAGTCAAGGTTGCCGTGACAAATTTCAACTACAGGATGAATTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTTTACTTCCCTATGAGTCCATAAATGACACTGGTATGTTCTATGGCATGAAATACTTTAATGATCTCTTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAATTCTTCTTCAGAAGAACCAGGATACATTCACATTCAAGCAGGGGTGGGCATTTCCTCGCAAGGTCTACTTTAATGGTGAGGAATGCATGCTGCCACCACCTGATAGCTACCCAATCCTCCCTAATTCTGCCCCTGTGAACCTATTAAACTTCCCAGCATTCGTTTTGACAATGCTTGTCATGATAACTGTTTGGTGA 1296 0.4491 MRLVISAVCVIVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAVSSFQVSIGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPTCACGCQNKRNCVKSNSKRINMVGIHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKVAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSEILLQKNQDTFTFKQGWAFPRKVYFNGEECMLPPPDSYPILPNSAPVNLLNFPAFVLTMLVMITVW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02309 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Gma08g02309 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Gma08g02309 431 PANTHER PROTEIN COBRA 4 428 IPR006918 GO:0010215|GO:0031225
Gma08g02309 431 PANTHER COBRA-LIKE PROTEIN 4 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02309 Gma-Chr8 22275843 22278007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02309 1 430 COBRA Gene Family AT3G29810 64.009 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02309 - - gmx:100783410 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02473 18 58793025 58795582 Gma08g02309 08 22275843 22278007 GST
Gma08g02309 08 22275843 22278007 Gma19g00316 19 4359465 4362164 PCT