Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02306 ATGGCCCAGTCCTTCGGTCAGACCGAGATCAACTGGGACAAGCTAGATAAAACTAGATTCTATGTCGTAGGAGCTGGACTCTTTACAGGTGTTTCGGTGGCACTTTATCCCGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCCACAAAGGATGCTGTAGAGAGAAATGTGTTTTCTGTTGCAAAAGGACTACTTAAAACAGACGGCATCCCTGGTTTGTATAGAGGGTTTGGCACAGTTATCACTGGTGCAATTCCTGCCAGAATCATATTCCTCTCCACTCTAGAGACCACAAAGGTGACTGCCTTCAGAATGCTTGAGCCATTTAGACTATCTGAAACTTCTCAGGCTGCCATTGCAAATGGAGTTGCAGGCATGACATCATCGCTTTTTGCTCAATCTGTGTTTGTACCAATTGATGTGGTCAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATTCCCAATATAGTGGGGGTCTGGATGTTGTTCGCAAGGTTTTAAGGACTGACGGCATCCGGGGATTGTATCGAGGGTTTGGTCTGTCTGTTATTACTTATGCACCTGCCAGTGCAGTATGGTGGGCAAGTTATGGTTCAAGCCAACGCTTCATTTGGAGATTCCTGGATCATGGTGCCAAATATGATGAAGTCGCACCTAGTATGCAGAAAATTATGTTAGTTCAGGCTACTGGAGGGATTATTGCTGGTGCAACTTCATCCTGCATTACAACCCCATTGGATACCATCAAGACACGATTACAGGTAATGGGACATGAAAATAGAAGTTCTATAAAACAAGTTGCCAAAGATTTAATCAATGAAGATGGTTGGAGAGGCTTTTATAGAGGGTTTGGTCCAAGATTTTTTAGCATGTCAGCATGGGGCACTTCAATGATATTGACTTATGAGTATCTGAAACGTGTATGCTCAAAAGATGAATAG 945 0.437 MAQSFGQTEINWDKLDKTRFYVVGAGLFTGVSVALYPVSVVKTRLQVATKDAVERNVFSVAKGLLKTDGIPGLYRGFGTVITGAIPARIIFLSTLETTKVTAFRMLEPFRLSETSQAAIANGVAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHSQYSGGLDVVRKVLRTDGIRGLYRGFGLSVITYAPASAVWWASYGSSQRFIWRFLDHGAKYDEVAPSMQKIMLVQATGGIIAGATSSCITTPLDTIKTRLQVMGHENRSSIKQVAKDLINEDGWRGFYRGFGPRFFSMSAWGTSMILTYEYLKRVCSKDE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02306 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Gma08g02306 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Gma08g02306 314 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Gma08g02306 314 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Gma08g02306 314 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Gma08g02306 314 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Gma08g02306 314 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 314 - -
Gma08g02306 314 Gene3D Mitochondrial carrier domain 20 314 IPR023395 -
Gma08g02306 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
Gma08g02306 314 Pfam Mitochondrial carrier protein 119 205 IPR018108 -
Gma08g02306 314 Pfam Mitochondrial carrier protein 228 313 IPR018108 -
Gma08g02306 314 Pfam Mitochondrial carrier protein 27 100 IPR018108 -
Gma08g02306 314 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02306 Gma-Chr8 22230742 22235589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02306 10 314 Chloroplast and Mitochondria Gene Families AT5G15640 73.941 1.01e-171 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02306 K15121 - gmx:100781796 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02470 18 58773309 58777900 Gma08g02306 08 22230742 22235589 GST
Gma13g00384 13 15788625 15794403 Gma08g02306 08 22230742 22235589 PCT
Gma19g00313 19 4336777 4341877 Gma08g02306 08 22230742 22235589 PCT
Gma08g02306 08 22230742 22235589 Gma13g00384 13 15788625 15794403 PCT
Gma08g02306 08 22230742 22235589 Gma19g00313 19 4336777 4341877 PCT