Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02303 ATGGGACCTGATGGCTCTTTCAACATGGGATTCAACCTCACATGGAAGCTTCCGGTTGATTCTGGCTTCACCTACTTGTTAAGGTTACCCTTTTGCCAGATTGACCCGCATGTTCTTCAGGCTGGTGATCTGGAATTCTACATCTTCATAGCGGATCAGTTGGCTACCGATAAGGCAGATGTTCTCTTATGGGCCAATAACGAGAAGGGTGTCCCAGTGGTTAGAGACTACGCAATTTCCATCCTGGGGAATCGGGAAAAGGTAAATCTTTCACTGAAAATGCATCCTCACCCTAGAAGCTTGATCAAGAACACACAACTAAACGCAATTGAACTCTTCAAAATCCACGACCCAACAGGTAATCTTGCTGGACCTAAACCAAATCTTCCTTTCTTGGTTCCCCATGAAAGCTCAAACAAGAAAAGCAACGGTACCATGAAAACCCTTGCTGCTGTCGCAGGTGCAGTTTCCAGTGTCGTTTTGCTCTCCTTTATTATCACTTTCTTCCTCATCAAACGCAGGAAGAACATTCTGGTCAACaaggattccaataataaagaaaagggttccaataaaaaagaGGGAACTTCTCGGGGAAGTGGCTCATTATCGCTACCAATGGACCTCTGCCGCCAATTCTCAATCACAGAAATGAGAGACGCCATGAACAACTTTGATGAAGTCTTTGTGGTTGGCATGCGAGGCTTCGGCAATGTGTACAAAGGCCACATCGACAATTGTTCAACTACAGTTGCAATCAAAAGGCTAAAACCAGGTTCTCGGCAAGTTATTCGCGAGTTCAAGAACGAGATCGAAATGCTGTCTCAACTTCGTCATCCCAATGTTGTTTCCCTCATCGGTTACTGTTATGAGAGCAATGAGATGATTGTTGTTTACGAATTCATGGATCGTGGAAACCTCCATGACCATATCTATGACACTGATAACCTGTCTCTATCGTGGAAGCATAGGCTGCAGGTATGCATAGGTGTTGCACGAGGATTGCATTATCTGCATACAGGTGCAAAGCAGGTGATCATTCACCGCGACGTGAAGAGTGCCAATATCTTATTGGATGAAAAATGGGAGGCCGAGGTTTCAGACTTCGGGTTATCCAGAATAGGGGGCCCCACAGGTATTTCGATGATGACCAGTGTGAACACTGAGGTGAAAGGTAGCATTGGATATTTGGACCCAGAGTATTACAAGCGAAACATTTTGACGGAGAAGTCTGACGTGTACTCCTTTGGGGTGATGCTTTTGGAGGTATTATCTGGGAGGCACCCTTTGCTCCGTTGGGAGGAGAAGCAACGAATGTCACTTGTTAATTGGGCAAAGCATTGCTATGAGAATGGAACTCTGAGTGAGATTGTGGATTCAGAACTGAAAGGCCAGATAGCACCTCAGTGTTTGGATAAATTTGGTGAGGTTGCACTGAGCTGTTTGCTTGAGGATGGAACTCATCGACCTTCCATGAACGACGTTGTTGGGGGGTTGGAGTTTGTTCTTCAGTTTCGAAATAGTGCTGTTAATTATGAAGATAGCAGTGGCCATAGTACTCTACCTGTTTCAGATTAG 1578 0.4423 MGPDGSFNMGFNLTWKLPVDSGFTYLLRLPFCQIDPHVLQAGDLEFYIFIADQLATDKADVLLWANNEKGVPVVRDYAISILGNREKVNLSLKMHPHPRSLIKNTQLNAIELFKIHDPTGNLAGPKPNLPFLVPHESSNKKSNGTMKTLAAVAGAVSSVVLLSFIITFFLIKRRKNILVNKDSNNKEKGSNKKEGTSRGSGSLSLPMDLCRQFSITEMRDAMNNFDEVFVVGMRGFGNVYKGHIDNCSTTVAIKRLKPGSRQVIREFKNEIEMLSQLRHPNVVSLIGYCYESNEMIVVYEFMDRGNLHDHIYDTDNLSLSWKHRLQVCIGVARGLHYLHTGAKQVIIHRDVKSANILLDEKWEAEVSDFGLSRIGGPTGISMMTSVNTEVKGSIGYLDPEYYKRNILTEKSDVYSFGVMLLEVLSGRHPLLRWEEKQRMSLVNWAKHCYENGTLSEIVDSELKGQIAPQCLDKFGEVALSCLLEDGTHRPSMNDVVGGLEFVLQFRNSAVNYEDSSGHSTLPVSD 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02303 525 Gene3D - 5 116 - -
Gma08g02303 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Gma08g02303 525 Gene3D Phosphorylase Kinase; domain 1 210 301 - -
Gma08g02303 525 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 1 515 - -
Gma08g02303 525 SMART serkin_6 225 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02303 525 Pfam Malectin-like domain 10 115 IPR024788 -
Gma08g02303 525 MobiDBLite consensus disorder prediction 182 203 - -
Gma08g02303 525 PANTHER OS07G0166700 PROTEIN 1 515 IPR045272 GO:0004714|GO:0006468
Gma08g02303 525 ProSiteProfiles Protein kinase domain profile. 225 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02303 525 CDD STKc_IRAK 235 496 - -
Gma08g02303 525 Pfam Protein tyrosine and serine/threonine kinase 232 496 IPR001245 GO:0004672|GO:0006468
Gma08g02303 525 Gene3D Transferase(Phosphotransferase) domain 1 302 518 - -
Gma08g02303 525 SUPERFAMILY Protein kinase-like (PK-like) 202 501 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02303 Gma-Chr8 22211706 22213461 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02303 1 509 Receptor kinase-like Gene Family AT3G51550 46.893 7.04e-155 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma08g02303 PK_Tyr_Ser-Thr 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02303 - - gmx:100780062 784.637