Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02298 ATGATCATTCACCGTGATGTCAAGAGCACCAGTATCTTGTTGGATGAAAAATGGGCAGCCAAGGTTTCAGACTTTGGGTTATCTCGAATTGGGCCCACAGGTATTTCGATGACTCATGTGAACATTAGGGTTAAAGGTAGCATTGGATATTTAGATCCAGAGTATTACAAACGACAATGTTTGAAAGAGAAGCACCTGCGTTATCTCCTTTTGCACTTTGTTCTCCATCTCCTTCCCAATCTAAGTGCGCTGATGTGGCTCTTTTTCAATCTGGAGAGGCTCAACGTCTTCAATGGGCATTGGATGATGGTCCTCGGTGTCTACTTATGGGTTTAG 336 0.4345 MIIHRDVKSTSILLDEKWAAKVSDFGLSRIGPTGISMTHVNIRVKGSIGYLDPEYYKRQCLKEKHLRYLLLHFVLHLLPNLSALMWLFFNLERLNVFNGHWMMVLGVYLWV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02298 111 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02298 111 PANTHER OS07G0166700 PROTEIN 1 65 IPR045272 GO:0004714|GO:0006468
Gma08g02298 111 Pfam Protein kinase domain 2 58 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02298 111 Gene3D Transferase(Phosphotransferase) domain 1 1 65 - -
Gma08g02298 111 SUPERFAMILY Protein kinase-like (PK-like) 2 59 IPR011009 -
Gma08g02298 111 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02298 Gma-Chr8 22165872 22166207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02298 2 64 Receptor kinase-like Gene Family AT5G38990 71.429 5.10e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma08g02298 Pkinase 9.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02298 - - gmx:100814046 116.316