Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02282 ATGATTAAGAGCCAAAAAGAAGCAGATTTTCAATTAAAACAGGAGGGTCTTTCTCAATCAATTAATGATCCTGAAAAGGCAAAGGCTACATCAAGCTCAGTAGCACAATGGCCAAGATTGAAGGATCCAAGGATTGTTCGAGTATCCAGAGCCTTTGGAGGAAAAGACAGGCATAGCAAGGTTTGCACTATAAGAGGGTTAAGAGACAGACGGGTGAGGCTATCAGTACCAACTGCCATCCAACTCTATGATCTTCAAGATAGGCTAGGGCTCAGTCAACCTAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCTAAGCATGAAATTGATGAACTTCCACCACTTCCCATTATTCCTTCAGTGAATAACTTCACCCTTGGTTATCCATCTGCTGTTACTTCTAATGAAGCTACCACCTCAAATTCTCAGCCTAATGAGCAACTTCTTAATATCAACAGAAGCATTCAATGGGAAGATTCAAACCATAATTCTACATGGAAATTAAAGGCTAAAGAAGTTTCAGGAGAAATGGTTAGCACTGATAAACCAAATTGGATAAGTAGAAGTCAAGAGGATAAGCAAGGAAGCAATAATCAAGGACCTAGCACACATGTTATACCAAATATTAATCTCTTACCAAGAGCAAATCTTAATCATCCTTCATTCTTGGGCTTGCTGAATACTATGCCACATGGTTACCGATGGGAACATTCTGCTGGTGATGTTTCTCATCCGTTGGGCAACAATGAATTATCAAACCTAACAGATATACACAACAATATTAACGTTGTACCTTTCCCAACATCATCATTGTCTTTATCAACTGGGAATTCTCAAATTATGCTATGTCCTCCAGGAGCAACGCAACCATATTTCCCTTCACATGTTACAGCAATGGACATGGATCCGAGGCAAATCAACCACTATCAGATGTTGAGTTCAGGTTCTGAAAATCCATTGGCGAATTCTCTCAATCATTCTTTCAGCCTGGCTATGATGGCTCATAAACCTCTTCTTTCACCCAACAGCAGCAAGAGCCCCTCTCACAAAGACCAAGATTTTCCTTAA 1068 0.4026 MIKSQKEADFQLKQEGLSQSINDPEKAKATSSSVAQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPIIPSVNNFTLGYPSAVTSNEATTSNSQPNEQLLNINRSIQWEDSNHNSTWKLKAKEVSGEMVSTDKPNWISRSQEDKQGSNNQGPSTHVIPNINLLPRANLNHPSFLGLLNTMPHGYRWEHSAGDVSHPLGNNELSNLTDIHNNINVVPFPTSSLSLSTGNSQIMLCPPGATQPYFPSHVTAMDMDPRQINHYQMLSSGSENPLANSLNHSFSLAMMAHKPLLSPNSSKSPSHKDQDFP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02282 355 MobiDBLite consensus disorder prediction 1 36 - -
Gma08g02282 355 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
Gma08g02282 355 MobiDBLite consensus disorder prediction 11 36 - -
Gma08g02282 355 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 352 - -
Gma08g02282 355 Pfam TCP family transcription factor 54 178 IPR017887 -
Gma08g02282 355 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 352 IPR005333 GO:0003700
Gma08g02282 355 MobiDBLite consensus disorder prediction 177 203 - -
Gma08g02282 355 MobiDBLite consensus disorder prediction 180 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02282 Gma-Chr8 21873431 21874498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02282 37 311 TCP Transcription Factor Family AT3G02150 39.100 8.32e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma08g02282 TCP 7.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02282 - - gmx:100807091 713.761