Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02280 ATGGGTTCTCACAACATCAAAATCCAGTACCACTCAAGGGTTTCCCCTCCCTCAGCAACACAAACATCACTCTCTCTTACTTTCTTCGATCTTTTCTGGCTCAGGTTCCACCCCGTGGAACGCATCTTCTTCTACACCCTCCCTACACCCCAATCAAACCCATCCATTTTCTATTCCAAAATCGTTCCAAAGCTCAAAACCTCTCTCTCTCACACCCTCCAACACTTTCCCCCTCTCGCCGGCAACGTCGTTTGGCCTAATGATTCCCCAAACCCCATCGTTCAATACACTCCAGGCAACTCCGTTTCATTTGTGGTAGCAGAATCCGAAGCTGATTTCAACCACGTGCTTGATAACTCACCCCACCAAGCATCGGAGTCTCGTTCTTTGGTGCCCCACTTGGATTCATCGGATTCTCATGCCTCTATTGTCTCTCTTCAAATCACTCTGTTCCCCAACAGAGGATTCAGCATAGGAATCAGCACCCACCATTCCGTTCTTGATGGTAAATCTTCAACTCTTTTCATCCAAGCTTGGTCTTCTTTATGCCAAACCAACGATGATGAGTCTTCAGAGTCATCATCACCATCTTTGGCACCAAAGTTGGTTCCTTTCTTTAACAGATCAGTCATCAGAACCCCAAGTGAGTTGGGACTTAACTTCCCAACCAATTGGACCGAGGCCTTAACCAAATTGTTCCCTACTGGAAACAGCGACGGGAGATGCTTGAAGCTACTACCTTTCCCTCCAAGACTCGAGGATGAGGTTCGAGCCACGTTCGTGCTCACAGGAGCAGATTTGGAGAAGTTAAGGAAAGTTTGCATTGCTAAGGCCATTCATGGAGTTGAAAAGGAGAAAGAGAAGTTTGCTTTTGCATTCACGGTGGATTGCAGGGCCAGGTTGGAGCCTCCAATCCCTGAGAACTATTTCGGCAACTGTGTTTGGGGTAATTTGGTGGATGCTGACCCACTAGACTTCATAAAGGAAGAAGCTTTTGGTATTGTTGCAAAGAGTATTCATAGTAAAATAAAAGAGATGTTAGATAAGGGGATTTTTCATGGGGCGGATAGTTCGTTTTCTAAATACGAGTCTATGGCAAAGGAGAAAGTTGAAGTCTTTGCAATTGCTGGGTCTAATCGATTTGGAGTTTATGGAACTGATTTTGGTTGGGGGAAGCCTGCAAAGGTCGAGATAACATCGGTGGATAGAGGTTTAACCATTGGGCTGGCAGAGAGCAAAGATGGGAATGGTGGAGTTGAAGTGGGGCTTGTTCTGAAGAAAAATGTCATGGATCTCTTTGCTACTCTGTTTCGTCGAGGAGTGTCAGATGAGTAA 1335 0.4577 MGSHNIKIQYHSRVSPPSATQTSLSLTFFDLFWLRFHPVERIFFYTLPTPQSNPSIFYSKIVPKLKTSLSHTLQHFPPLAGNVVWPNDSPNPIVQYTPGNSVSFVVAESEADFNHVLDNSPHQASESRSLVPHLDSSDSHASIVSLQITLFPNRGFSIGISTHHSVLDGKSSTLFIQAWSSLCQTNDDESSESSSPSLAPKLVPFFNRSVIRTPSELGLNFPTNWTEALTKLFPTGNSDGRCLKLLPFPPRLEDEVRATFVLTGADLEKLRKVCIAKAIHGVEKEKEKFAFAFTVDCRARLEPPIPENYFGNCVWGNLVDADPLDFIKEEAFGIVAKSIHSKIKEMLDKGIFHGADSSFSKYESMAKEKVEVFAIAGSNRFGVYGTDFGWGKPAKVEITSVDRGLTIGLAESKDGNGGVEVGLVLKKNVMDLFATLFRRGVSDE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02280 444 PANTHER - 272 444 - -
Gma08g02280 444 Gene3D - 6 233 IPR023213 -
Gma08g02280 444 PANTHER - 1 272 - -
Gma08g02280 444 Gene3D - 252 442 IPR023213 -
Gma08g02280 444 Pfam Transferase family 284 434 - -
Gma08g02280 444 Pfam Transferase family 11 189 - -
Gma08g02280 444 SUPERFAMILY CoA-dependent acyltransferases 249 412 - -
Gma08g02280 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 272 - -
Gma08g02280 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 272 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02280 Gma-Chr8 21855915 21857342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02280 6 433 Monolignol Biosynthesis Gene Families AT5G48930 25.745 9.32e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02280 - - gmx:100815354 763.066