Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02279 ATGTGTCTCAAATGGATGGTTGAGCTTCACATACCAGACATAATCCACAACCATGCCCAACCCATTACTCTTCCTGAGTTGGTGTCTATTCTACAAGTTCCTCCTACTAAAATTGGTCAGGTACATAGCCTCATGCGCTACTTGGCACACAGTGGATTCTTTGAAAGAGTAAGAATCCATCACAACATAGAAGAAAAAGAAGCGTATGCTCTCACTGCTGCATCAGAGTTACTTCTCAAAAGCAGTGAGCTTAGTTTAGCTCCAATGGTTGAGTTTGTTCTCGACCCAACTCTGTCAGATTCATACCATCAACTGAAAAAGTGGGTTTATGAGAAAGATCTCACATTGTTTGACATCTCCTTTAGGATCACATTGATATTCAATGAAGCAATGGCTAGTGATTCTCAAATGAGTAACTTGGCATTGAGAGATTGCAAGTTGGTGTTTGAAGGACTAGAATCCATTGTGGATGTTGGTGGTGGAACTGGAACCACTGCCAAGATTATCTGTGAAGCATTTCCTAACTTGAAATGCATTGTGTTTGACCGTCCACAAGTTGTGGAGAACTTGTCAGGAAGCCTCAATTTGACATATGTAGGTGGGGACATGTTCAAATCTATTCCCAAGGTTGATGCAGTTCTGCTTAAGTGGATTCTACATAATTGGATTGATAAAGATCGCATAAAGATATTAAAGAATTGTAAAGAAGCTATTTCAAATGAGGGTGGCAAAAGAGGAAAAGTGATTATCATAGATGTTAGAGAAATGAAGAAACTCTTCATGGAAGCAGGGTTCCAAGACTACAAAACATCTCCCTTGACCGGATATTTGTCTCTGATTGAGATCGACTCTATATTGTCGCGCCTCACAAACCCTTCCTCTCCCAACCAATTCTTCTTCTTCTTCTTCTTCGACGACTACATTGCATTTTTGTACAGGTTCTTTATGTCGCACCACTGTCACTCTTTGCTTGTGCTACCTTTGTCGGTGCTTTATTTGAGGTTAAGGAGCAAACAAGGGTTTGGTTGCAACAAAAGGGGAGAGGGGTTGGGTTTCTTTGTGGCGTAA 1068 0.4092 MCLKWMVELHIPDIIHNHAQPITLPELVSILQVPPTKIGQVHSLMRYLAHSGFFERVRIHHNIEEKEAYALTAASELLLKSSELSLAPMVEFVLDPTLSDSYHQLKKWVYEKDLTLFDISFRITLIFNEAMASDSQMSNLALRDCKLVFEGLESIVDVGGGTGTTAKIICEAFPNLKCIVFDRPQVVENLSGSLNLTYVGGDMFKSIPKVDAVLLKWILHNWIDKDRIKILKNCKEAISNEGGKRGKVIIIDVREMKKLFMEAGFQDYKTSPLTGYLSLIEIDSILSRLTNPSSPNQFFFFFFFDDYIAFLYRFFMSHHCHSLLVLPLSVLYLRLRSKQGFGCNKRGEGLGFFVA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02279 355 Pfam Dimerisation domain 1 49 IPR012967 GO:0046983
Gma08g02279 355 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 254 282 - -
Gma08g02279 355 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 1 253 - -
Gma08g02279 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 83 281 IPR029063 -
Gma08g02279 355 Pfam O-methyltransferase domain 122 253 IPR001077 GO:0008171
Gma08g02279 355 Gene3D Vaccinia Virus protein VP39 79 283 IPR029063 -
Gma08g02279 355 Gene3D - 1 78 IPR036388 -
Gma08g02279 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 327 IPR016461 GO:0008168
Gma08g02279 355 PANTHER O-METHYLTRANSFERASE 254 282 IPR016461 GO:0008168
Gma08g02279 355 PANTHER O-METHYLTRANSFERASE 1 253 IPR016461 GO:0008168
Gma08g02279 355 SUPERFAMILY "Winged helix" DNA-binding domain 1 82 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02279 Gma-Chr8 21850035 21853228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02279 1 242 Monolignol Biosynthesis Gene Families AT5G54160 31.923 5.63e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02279 K22588 - gmx:100813225 430.639