Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02278 ATGGCTTCTTCAATGAATGGTCGCAATGTAAGTGAGATCTTTCAAGGTCAAACTCCCTTGTACAAACACTTGTATGCCTTCATAGACTCTATGTGTCTCAAAAGGGTGGTTGAGCTTTGGATATCTGACAAAATCCACAACCATGCCCAATCCATTACTCTTCCTGAGTTGGTGTCAGTTCTACTAGTTCCATCAACTAAAATTGGCCAAGTGCAAAGCCTCATGCACTACCTTGCACACAATGGATTCTTTGAAAGATTTCTTCTCAAAAGCAATGAGCTTAGTTTAGCTCCAATGGTTGAGTTTGTTCTCAACCCAACTCTGTCAAATTCATACCATCAATTGAAAAAATGGGTTTATGAGAAAGATCTCACATTATTTGACATCTCCTTAGGATCACAATTAACCACTGCCAAGATTATCTGTGAAGCGTTTCCTAACTTGAAATGCATTGTGTTTGACCGTCCACAGGTTGTAGAGAACTTGTCAGGAAGCAACAATTTGACATTTGTTGGTGGGGACATGTTCAAATCTATTCCTAAGGCTGATTCAATTCTTCTTAAGCTACGCAGCTTGGCCCGGGACACTTTCCGGCAACGGTGGTTTTCCCTTGGCGCCGGATTCATCGGTTCAGCTCACCGCACCGGCCGGCTCTGGGCCCGGAGCGGGTGCATCTTCGACGACTCTGACAACGGGAAATGCTTAACCGGAGACTGTGCCGGAGGACTGAGGTGCACCGGAGCCGGTGTTCACGGTCGGATCCGCCAGTAA 771 0.4578 MASSMNGRNVSEIFQGQTPLYKHLYAFIDSMCLKRVVELWISDKIHNHAQSITLPELVSVLLVPSTKIGQVQSLMHYLAHNGFFERFLLKSNELSLAPMVEFVLNPTLSNSYHQLKKWVYEKDLTLFDISLGSQLTTAKIICEAFPNLKCIVFDRPQVVENLSGSNNLTFVGGDMFKSIPKADSILLKLRSLARDTFRQRWFSLGAGFIGSAHRTGRLWARSGCIFDDSDNGKCLTGDCAGGLRCTGAGVHGRIRQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02278 256 SUPERFAMILY Osmotin, thaumatin-like protein 210 251 IPR037176 -
Gma08g02278 256 Pfam O-methyltransferase domain 126 188 IPR001077 GO:0008171
Gma08g02278 256 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 136 189 - -
Gma08g02278 256 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 135 - -
Gma08g02278 256 Gene3D - 1 102 IPR036388 -
Gma08g02278 256 SUPERFAMILY "Winged helix" DNA-binding domain 11 86 IPR036390 -
Gma08g02278 256 Pfam Thaumatin family 213 249 IPR001938 -
Gma08g02278 256 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Gma08g02278 256 PRINTS Pathogenesis-related protein signature 217 228 IPR001938 -
Gma08g02278 256 PRINTS Pathogenesis-related protein signature 230 256 IPR001938 -
Gma08g02278 256 PANTHER O-METHYLTRANSFERASE 136 189 IPR016461 GO:0008168
Gma08g02278 256 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 94 188 IPR029063 -
Gma08g02278 256 Gene3D Vaccinia Virus protein VP39 125 193 IPR029063 -
Gma08g02278 256 PANTHER O-METHYLTRANSFERASE 2 135 IPR016461 GO:0008168
Gma08g02278 256 Gene3D Thaumatin 205 254 IPR037176 -
Gma08g02278 256 ProSiteProfiles Thaumatin family profile. 211 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02278 Gma-Chr8 21824171 21830588 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02278 120 188 Monolignol Biosynthesis Gene Families AT5G54160 42.029 7.96e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02278 - K22588 gmx:100813225 283.878