Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02244 ATGAATGAGCCGGATAAAGACATAAAGTATTTGGACTTCAAGAGTCATACTGTCATGAACCAACAAGAATTCAATTTTTCTTTGGTTGACAAGTTTCTTTTGGGGTTTGCTTTTCCTCCGTTGCTGGGTTTGACTGTGAGAAGAAAAGGTAATGTTTATGTTGTGCATGTGTGTTTTAGCTTTCGTTTGGCTTTTGCTGGGTGTTTTTTGGTTCACAATTTTGTTTTGCAGTTTAGTTTTGCTGAGTTTGATCGGGAGAAGCTAAGGGTTTGCGATTATAAAGTTATGGCACGTGTTGTTGATAAAATAAAATTGATAGATGGATCAAGGGAAGCTCTTAAGCTTTCTATAAGGATTACTAATCTTTGGTTCATTAGGATTCCCGAAAAGACTGAACAAGCCGAAATGGTGGTTGTTGATTCTGATGGAGACGAAATCCATGTTGTTTGCAAGCAGGATCAGCTGAAGTCTCGCAAGGCTGATTTGAAAGAAAATTTGACTTATGTGATGCATAATTTTAAAGTTATCAAGAATGATGGGAAATTCAGAGTTTGTGATCATGAATATAAATTATGTTTTACTGGAGTTACTGTTGTTAGGCAATGTGATATGGAACAGTTACCTTTTAGGAAATTCAGATTTGTTGCTTTTTCCAGTGTCATTGCTGGTCATTTTAAAATTGGACTCTTGGTTGTGGTATTCCGATATGTGTCATCCAAAAATACGAGGGTTGTTTTGAATTTAAAGGATTTAAGTGGACAGGTGCTATCCTATACACTCTGGGAAAATTACTGCCTACAGTTTTTGTCTTATTTGAATGATATTGAAGATGAAAGACTGATCGTTATTCTCTTGACTCATGCTAGGATTAAGGAAGCACAGGGATCATATCCGGCATCGGTCAGTAATTCTTTCAAGGCGTCTAAACTCATGATCAATGACCTCATGCTGGAAATCCAAGAATTTAGAGAGAGTCTTTTAGATTTAGGGATCGAGGTTAGATCAATTTTGACGCCTATTGGACAAGGGAGTtcacaggtttcaaggtcatctcaattatcatcaaaagatgcgtTTCTGTCAAATACTGAAGTAAAAAATATCTCTCAGATTAATGCCAGTTCAGAGGAGTTTGTTTGTGTTACTGTCGCCAAGATTACAACCATAGTGATGGACAACTATTCATGGTGCTATTTGGCTTGTGGTCAATGTTATAAAAAAACTGGCATGCAAACTGTGTCGTTCACATGTCTGTGTGGCAAAGAGAATGATCAACCTGAACTGAGGTATCGGGTTGAGGTGATTGTTAATCACAAGGGTGAACAAACCAAATTTTTGATCTGGGATTGTGAATGTGCACAGTTAATTGGTCAGTCCACGGATGAAGTCAACAGGTTCAAAATAGAAGATGGGGACGTTGATTTAAATGCCTCTCCTCAAGCACTAGATAGGCTATTGGGTTGTTTCCTTGCATTCAGAGTGAAGGTGCAACCAACGTTCAGGAATTCTGTTGTTCTTAAATATTCAAATGAATCAGACTTGATCAATGTTGTGCTAGATATGATTCCCGATAGTGAGCAATCTGTGTCTATTACCGGGGATCATGACCCTCTTCTCAAGATTCCATTGACACCAATTAAGCGCGTATCTTCTGATGAGTTGGATAATGAGGGAAAAAACTTTCAGATTTCACCTGCTGAAGTTTCCTCGAACAAATTAGCCAGGCATTCTTAG 1734 0.3708 MNEPDKDIKYLDFKSHTVMNQQEFNFSLVDKFLLGFAFPPLLGLTVRRKGNVYVVHVCFSFRLAFAGCFLVHNFVLQFSFAEFDREKLRVCDYKVMARVVDKIKLIDGSREALKLSIRITNLWFIRIPEKTEQAEMVVVDSDGDEIHVVCKQDQLKSRKADLKENLTYVMHNFKVIKNDGKFRVCDHEYKLCFTGVTVVRQCDMEQLPFRKFRFVAFSSVIAGHFKIGLLVVVFRYVSSKNTRVVLNLKDLSGQVLSYTLWENYCLQFLSYLNDIEDERLIVILLTHARIKEAQGSYPASVSNSFKASKLMINDLMLEIQEFRESLLDLGIEVRSILTPIGQGSSQVSRSSQLSSKDAFLSNTEVKNISQINASSEEFVCVTVAKITTIVMDNYSWCYLACGQCYKKTGMQTVSFTCLCGKENDQPELRYRVEVIVNHKGEQTKFLIWDCECAQLIGQSTDEVNRFKIEDGDVDLNASPQALDRLLGCFLAFRVKVQPTFRNSVVLKYSNESDLINVVLDMIPDSEQSVSITGDHDPLLKIPLTPIKRVSSDELDNEGKNFQISPAEVSSNKLARHS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02244 577 MobiDBLite consensus disorder prediction 554 577 - -
Gma08g02244 577 Gene3D - 206 331 IPR012340 -
Gma08g02244 577 SUPERFAMILY Nucleic acid-binding proteins 363 502 IPR012340 -
Gma08g02244 577 CDD RPA1_DBD_A_like 114 199 - -
Gma08g02244 577 CDD RPA1_DBD_B_like 227 326 - -
Gma08g02244 577 Gene3D - 347 516 IPR012340 -
Gma08g02244 577 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 106 450 - -
Gma08g02244 577 MobiDBLite consensus disorder prediction 556 571 - -
Gma08g02244 577 Pfam Domain of unknown function DUF223 135 222 IPR003871 -
Gma08g02244 577 Gene3D - 98 202 IPR012340 -
Gma08g02244 577 PANTHER REPLICATION FACTOR A 1, RFA1 106 450 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma08g02244 577 SUPERFAMILY Nucleic acid-binding proteins 114 202 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02244 Gma-Chr8 21436462 21444057 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02244 138 440 Core DNA Replication Machinery Family AT2G06510 26.426 8.29e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02244 - - gmx:102668313 846.654