Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02215 ATGTATCAGTGGATTATCGTGAGAGTTCACATGTGGATTAGCAAAAAGTTGCGACCAAGGAATTCAATTAGCAATGGAGATAGCAGCAGCGACACCTTTCACAACGGTGCCAGTACTGACACCGTTGTTGTGGATGACAATCCATTTAGCAGCGGGGTGGAGTGTTACGCCTGCACGCAGGTAGGCGTGCCGGTGTTTCACTCCACCAGCTGCGACAGTGCCTACCATCAGCTGCAGTGGGAGGCTTCTGCTGGATCGTCTCTGGTTCCAATCCAGAGCCGGCCCAAAAAGGTCCTCGGCTTCCGGACCGTGTCTGGTTTGACACGGGGGCCGTTCGGGCGGGTTCTGGATCCGCGGAGCAAGCGAGTGCAGAGGTGGAACCGCGCGCTGCTGCTGGCGCGTGGGGTGGCGCTGGCGATCGACCCGCTGTTCTTCTATTCGCTGTCGATAGGGAGGGAGGGGTCGCCGTGTTTGTACATGGACGGAGGGCTGGCGGCGATGGTGACGGTGGCGCGGACGTGCGTGGACGCGGTGCACCTCTTGCACGTGTGGCTGCAGTTCAGGCTGGCGTACGTGTCGCGGGAGTCGCTGGTGGTGGGGTGCGGGAAACTCGTGTGGGACGCGCGTGACATCGCGTCTCATTACCTGAGATCGTTGAAGGGGTTCTGGTTCGACGCATTCGTGATTCTCCCAGTTCCCCAGGTTGTGTTTTGGCTGATAGTGCCAAAATTGCTACGAGAAGAGAAAATTAAAATCATTATGACAATAATGCTATTGATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCATAGCATCTGCATGATGAGACGAATGCAAAAAGTCACAGGCTACATCTTTGGCACTATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTTATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGTGTTGCATCCTGCCTCCGGCAGCAGTGTGAGAGAACTAATGGATGCAATCTTTCTGTGTCATGCTCAGAGGAGATATGCTACCAGTCTTTGTTACCAGCTAGCGCGATAGCAGATTCATGTGGTGGAAACTCAACAGTGGTAAGAAAGCCTTTGTGCTTAGATGTTCAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCTGTCATATCCAGCAACTCTTTGGCTGTAAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTCGGAAATGATCTTGAACCCACAAGCAACTGGCTAGAAGTGATTTTCAGTATATGCATAGTACTCAGTGGACTATTGCTTTTCACATTATTGATTGGTAACATTCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCGCGATTAAGACAAAGAGTTCGCCATTTTGAACGTCAAAGATGGGCAGCGATGGGAGGAGAAGATGAGATGGAAATGATCAAAGACTTGCCGGAGGGGCTGAGGAGGGACATCAAGCGCCATCTTTGCCTCGACCTCATTAGAAAGGTTCCTCTATTCCACAACATGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAGCCCCTAGTCTTCTCTAAAGACGAAAAGATAATCAGAGAAGGTGATCCTGTACCAAGGATGGTGTTCGTTGTCCGAGGGCGCATAAAACGCAACCAAAGCCTTAGCAAAGGCATGGTAGCCTCAAGCATCCTTGATCCCGGAGGGTTTTTGGGTGACGAGCTACTTTCATGGTGCCTTCGTCGGCCGTTTATCGACAGACTTCCGGCCTCCTCCGCCACATTTGTATGTCTTGAATCAGCAGAAGCCTTTGGCCTTGATGCCAATAACTTGAGGTACATCACTGATCACTTCCGGTACAAATTTGCAAATGAGAGGCTGAAAAGAACAGCAAGATATTACTCATCCAATTGGAGAACTTGGGCTGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAAAGGTCCTGTGATCCCTGTAAGGGACACTAATGGAGGCACTGAACGCAGGCTCTTGCAATATGCTGCATTGTTCATGTCATTAAGGCCACATGACCACCTTGAATGA 2157 0.4965 MYQWIIVRVHMWISKKLRPRNSISNGDSSSDTFHNGASTDTVVVDDNPFSSGVECYACTQVGVPVFHSTSCDSAYHQLQWEASAGSSLVPIQSRPKKVLGFRTVSGLTRGPFGRVLDPRSKRVQRWNRALLLARGVALAIDPLFFYSLSIGREGSPCLYMDGGLAAMVTVARTCVDAVHLLHVWLQFRLAYVSRESLVVGCGKLVWDARDIASHYLRSLKGFWFDAFVILPVPQVVFWLIVPKLLREEKIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTNGCNLSVSCSEEICYQSLLPASAIADSCGGNSTVVRKPLCLDVQGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCLDLIRKVPLFHNMDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFVVRGRIKRNQSLSKGMVASSILDPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESAEAFGLDANNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTKGPVIPVRDTNGGTERRLLQYAALFMSLRPHDHLE 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02215 718 Gene3D Jelly Rolls 528 646 IPR014710 -
Gma08g02215 718 Gene3D - 157 453 - -
Gma08g02215 718 CDD CAP_ED 530 640 IPR000595 -
Gma08g02215 718 SUPERFAMILY Voltage-gated potassium channels 117 451 - -
Gma08g02215 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 718 - -
Gma08g02215 718 Gene3D Helix hairpin bin 456 521 - -
Gma08g02215 718 ProSiteProfiles cAMP/cGMP binding motif profile. 530 640 IPR000595 -
Gma08g02215 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 58 718 - -
Gma08g02215 718 SUPERFAMILY cAMP-binding domain-like 457 644 IPR018490 -
Gma08g02215 718 Pfam Ion transport protein 126 448 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02215 Gma-Chr8 21055625 21061268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02215 20 718 Ion Channels AT5G15410 76.512 0.0 1047
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02215 K05391 - gmx:100810471 1434.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02412 18 58217968 58223720 Gma08g02215 08 21055625 21061268 GST