Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02203 ATGGATGCAGCAGCTGGCCAGGGTTATTGTGGTGGTGCAGACCTGGACATGTTTCTAACGAATTATAAATTGGGAAAAACTCTTGGCATTGGATCCATGGGCAAGGTGAAAATTGCAGAACATGTATTGACTGGCCAGAAGGTTGCCATCAAGATCCTTAACCGTCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAAAAGAGAAATCAAAATTTTAAGATTGCTCGTGCATCCTCACATTATACAACTTTATGAGATCATAGAGACCCCGATTGACATCTATATTGTTATGGAGTATGCAAAATCAGGAGAGCTCTTTGATTACATAGTAGAAAAAGGTAGGTTACAAGAAGATGAAGCTCGTAATATTTTTCAGCAGATAATCTCTGGTGTGGAGTATTGTCACAGCAACATGGTGGTTCATAGAGATTTGAGGCCTGAGAAAGTACTCTTGGACTCCAAATGTAATGTCAAGATTGCTGGATTTGGCTGGAGCAACATCATTCGCGATGGTCACTTTCTTAAGACACGTTGTGGAAGTAGTAACTATGCAGCTCCTGAGGTTATCTCTGGGAAATTATATGTTGGACCAAAAGTTGATGTCTGGAGTTGTGGTGTAATTTTATATTTTCTTCTTTGTGGTTCTTTTCCTTTTGACGATGAAAACATCCCAAATCTCTTCAACAAAATAAAGGGTGGGATTTTCACTCTTCCTTGCCATCTATCTCCTGGAGCCAGTGATTTGATACCAAAGATGCTCATGGTTGACCCCGTGAAGAGGATGACCATACCTGAGATCTGTCAACACCCATGGGTTCCTTTAATCTCGTTATTCCTCTTCACTCCCAAACTCCGTTCACTCCAACAACACTCTGATTTAGAAATGGATGGACCGGCTGGTCGAGGTGGTGCTGGACTGGACATGTTTCTGCCAAATTATAAATTGGGAAAAACACTTGGGATTGGATCTTTTGGCAAGGTCAAAATTGCAGAACATGTATTGACTGGCCATAAGGTTGCGATCAAGATTCTTAACCGACGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTATTCATGCATCCTCACATTATACGACTTTATGAAGTCATAGAAACTCCAACTGACATATATTTTGTCATGGAGTATGTGAAGTCTGGAGAGCTGTTCGATTACATTGTAGAGAAGGGCAGGTTGCAGGAAGATGAAGCTCGTAATTTTTTTCAGCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTTCATAGAGATTTGAAGCCTGAGAATTTACTTTTGGACTCCAAATGTAATGTCAAGATTGCTGATTTTGGCTTGAGCAACATCATGCGTGATGGCCACTTTCTTAAAACAAGTTGTGGAAGCCCTAACTATGCAGCTCCTGAGGTTATCTCTGGGAAACTGTATGCTGGACCTGAAGTGGATGTCTGGAGCTGTGGTGTAATTTTATATGCGCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCAAATCTCTTCAAGAAAATAAAGGGCGGTATTTACACTCTTCCCAGTCATCTATCTCCCAATGCTAGAGATTTGATACCAGGGATGCTTGTGGTTGACCCTATGAGGAGAATGACCATACCTGAGATCCGTCAACACCCATGGTTCCAAGCTCGACTTCCGCGTTATTTAGCTGTGCCACCACCAGATACAATGCAACAGGCCAAAAAGATTGACGAGGAGATCCTTCAGGAAGTGGTGAAAATGGGATTTGACAGGAATCAATTGGTTGAATCTCTTGGGAACAGGATACAAAATGAGGTTTGTGCCTTTGATTTTCTCCTTCTATATCTGTCAGATAAATCCCTTACTTCCATCCATGTATTTCAGGGTACTGTGGCATACTATTTGTTATTGGACAACCGATTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACCATGGATTCCGGTTTTAATCAAATGCAAAACTCTTCAGTTGTTGGAAACCGTTTTCCAGGCTACTTGGAGTATCCGGGAGTAGGATCGAGGCAACAGTTCCCTGTTGAAAGGAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCTTTGCAAGAATTAAATGTTTGTTGGAAGAAGATTGGTCACTACAACATGAAGTGTAGGTGGGTTGCTGGCATTCCTGGTCATCACGAAGGAATGGTTAACAATAATGTAGATAATAATAATTTCTTTGGAGATGATTCCAACATCATTGAGAATGATGCTGTTTCTACTTCAAATGTGGTCAAATTTGAAGTGCAGCTTTACAAAGCCCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTGCAGGGTCCACAGTTTCTTTTCTTGGATCTATGTGCTGCTTTCCTTGCACAGCTTCGGGTCCTCTAG 2493 0.4148 MDAAAGQGYCGGADLDMFLTNYKLGKTLGIGSMGKVKIAEHVLTGQKVAIKILNRRKIKNMEMEEKVKREIKILRLLVHPHIIQLYEIIETPIDIYIVMEYAKSGELFDYIVEKGRLQEDEARNIFQQIISGVEYCHSNMVVHRDLRPEKVLLDSKCNVKIAGFGWSNIIRDGHFLKTRCGSSNYAAPEVISGKLYVGPKVDVWSCGVILYFLLCGSFPFDDENIPNLFNKIKGGIFTLPCHLSPGASDLIPKMLMVDPVKRMTIPEICQHPWVPLISLFLFTPKLRSLQQHSDLEMDGPAGRGGAGLDMFLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYFVMEYVKSGELFDYIVEKGRLQEDEARNFFQQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPNARDLIPGMLVVDPMRRMTIPEIRQHPWFQARLPRYLAVPPPDTMQQAKKIDEEILQEVVKMGFDRNQLVESLGNRIQNEVCAFDFLLLYLSDKSLTSIHVFQGTVAYYLLLDNRFRVSSGYLGAEFQETMDSGFNQMQNSSVVGNRFPGYLEYPGVGSRQQFPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVAGIPGHHEGMVNNNVDNNNFFGDDSNIIENDAVSTSNVVKFEVQLYKAREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02203 830 CDD AMPKA_C 705 827 - -
Gma08g02203 830 CDD STKc_AMPK_alpha 21 273 - -
Gma08g02203 830 Pfam Kinase associated domain 1 787 829 IPR001772 -
Gma08g02203 830 Gene3D Kinase associated domain 1, KA1 711 828 - -
Gma08g02203 830 CDD STKc_AMPK_alpha 312 568 - -
Gma08g02203 830 ProSitePatterns Protein kinases ATP-binding region signature. 321 344 IPR017441 GO:0005524
Gma08g02203 830 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 282 - -
Gma08g02203 830 SMART uba_6 591 628 IPR015940 -
Gma08g02203 830 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 304 829 - -
Gma08g02203 830 Gene3D Transferase(Phosphotransferase) domain 1 307 645 - -
Gma08g02203 830 Gene3D Transferase(Phosphotransferase) domain 1 12 292 - -
Gma08g02203 830 SUPERFAMILY Protein kinase-like (PK-like) 19 278 IPR011009 -
Gma08g02203 830 SUPERFAMILY KA1-like 648 829 IPR028375 -
Gma08g02203 830 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Gma08g02203 830 ProSiteProfiles Protein kinase domain profile. 315 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02203 830 Pfam Protein kinase domain 22 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02203 830 Pfam Protein kinase domain 315 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02203 830 SUPERFAMILY Protein kinase-like (PK-like) 312 584 IPR011009 -
Gma08g02203 830 PANTHER SERINE/THREONINE KINASE 304 829 - -
Gma08g02203 830 PANTHER SERINE/THREONINE KINASE 11 282 - -
Gma08g02203 830 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 781 829 IPR001772 -
Gma08g02203 830 CDD UBA_SnRK1_plant 590 653 - -
Gma08g02203 830 SMART serkin_6 22 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02203 830 SMART serkin_6 315 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02203 830 ProSiteProfiles Protein kinase domain profile. 22 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02203 830 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 589 629 IPR015940 -
Gma08g02203 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02203 Gma-Chr8 20910701 20929281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02203 315 568 CBL-interacting serine-threonine protein kinases AT4G24400 51.765 7.04e-86 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Gma08g02203 Pkinase 9.8e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02203 K07198 - gmx:100806916 998.423