Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02188 ATGAAAGGTATTGTGATATTACCGTTCTGTTCTCCCATGGCTTTCGCAGCAGCTCCTCTTATCCAGGTTGTATTATACGGAAATCCCAAGTTTTTGTTTTTGAGGAGTACTGCTCGTTGCACGGTCCACGCCTCTCGCAGACCACCACCCCCTGGGCCTGGAGTTGACACCAGAATCCATTGGGAAAACGAAGATGAAGGTTGGATTGGAGCTACCAATACCAAACACCAACAGACCCACAAACCCAATAACAACATGTTACAGGCTGATGACTTTCCTGATTTCCTCACCGCTTCTTTAGGTTCTCATTACGAATTCTTGGGTGTATCACCAGATGCGGATGTAGAAGAAATTAAAGTTGCTTATCGGAAATTGTCAAAGGAGTATCATCCCGACACAACTTCCCTGCCTCTCAAAACTGCCTCAGAAAAATTCATGAAATTAAGAGAGGTTTACAACGTTCTTAGCAATGAAGAGAGTCGAAAGTTTTATGATTGGACCCTTGCTCAAGAGGCTGCAAGCCGCCACGCAGAGAAGATGAAAATGAAATTAGAAGATCCTCGCCAGCAACAACTCAAGAACTGGGAACCTGTTCCAGACATGGTTGACCGCCTTGGTGGAAGGAATATGAAGCTTAGTGATCAGGCAGTTTCGGCCATCACCATTGATCTCTTTATCATTGTTTTTGCCCTATGTTGTATCATATATGTTATTTTCTTTAAAGAACCCTATTACTATTAG 741 0.4332 MKGIVILPFCSPMAFAAAPLIQVVLYGNPKFLFLRSTARCTVHASRRPPPPGPGVDTRIHWENEDEGWIGATNTKHQQTHKPNNNMLQADDFPDFLTASLGSHYEFLGVSPDADVEEIKVAYRKLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSNEESRKFYDWTLAQEAASRHAEKMKMKLEDPRQQQLKNWEPVPDMVDRLGGRNMKLSDQAVSAITIDLFIIVFALCCIIYVIFFKEPYYY 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02188 246 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 14 244 IPR044618 -
Gma08g02188 246 SUPERFAMILY Chaperone J-domain 101 170 IPR036869 -
Gma08g02188 246 ProSiteProfiles dnaJ domain profile. 102 168 IPR001623 -
Gma08g02188 246 Gene3D DnaJ domain 94 189 IPR036869 -
Gma08g02188 246 Pfam DnaJ domain 103 165 IPR001623 -
Gma08g02188 246 ProSitePatterns Nt-dnaJ domain signature. 145 164 IPR018253 -
Gma08g02188 246 PRINTS DnaJ domain signature 104 122 IPR001623 -
Gma08g02188 246 PRINTS DnaJ domain signature 122 137 IPR001623 -
Gma08g02188 246 PRINTS DnaJ domain signature 140 160 IPR001623 -
Gma08g02188 246 SMART dnaj_3 101 160 IPR001623 -
Gma08g02188 246 CDD DnaJ 103 157 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02188 Gma-Chr8 20788306 20789414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02188 103 170 C2H2 Transcription Factor Family AT1G74250 36.111 3.72e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02188 K23051 - gmx:100805859 509.99