Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02184 ATGGCATCCAATAATCCTTACGAGATAATGGACGATGAGGGATTTGACTGGGAAGCAGCTGCTAGAGAAATCGACGTGGTTTGCCAGACGACCAGTGACGTAAAGGGAAAGGGAAGGGTTTTTGAGAAGAGAAAGCAGCAATCCACTCTCGATAAGTTCATATCTATTGCCAATGCCAATGCCGAAAAGGAAACCCCACCACCGCAGTTCCAAGAAGATGACCAAAGCCCTGCTTTCATCCACCACATTGACACCGAGGCTGCCAAAACTTGGATATATCCAGTTAATGTTCCTCTCCGTGACTATCAATTTGATATTACCCAGTCCGCACTTTTCTCAAACACATTGGTGGCCTTGCCAACGGGACTTGGCAAAACCCTCATTGCCGCTGTTGTTATGTATAACTACTTCAGATGGTTTCCTCAAGGCAAAATAGTCTTTGCTGCTCCTTCTCGGCCACTTGTCATGCAGCAGATAGAAGCATGCCACAATATTGTGGGAATACCTCAAGAATGGACAGTTGATATGACTGGTCAGCTAAGTCCTCCCAAAAGAGCTCAATTTTGGAAAACAAAGCGAGTTTTCTTTGTCACTCCACAAGTGTTGGAAAAGGATATTCATTCTGGTACATGTTTGGTGAAGTACTTGGTATGTTTGGTGATTGATGAAGCTCACAGAGCAATGGGAAATTACGCTTATTGTGAAGCTGTTCGCGAGTTAATGTCTGTACCAGTACAGCTGAGAATATTAGCGTTAACTGCAACGCCAGGATCAAAGCAACAGACAGTCCAAGCTGTCATTGATAATTTGCATATCTCCAGACTTGAATATCGCAGTGAAACTGACCATGATGTTATCTCATATGTTCACAGTAGGAAGATAGAATTGATACAGGTAGTTGCAATGGGCCCAGAAGCGGTAGAAATAAACAATAAGTTTATGGAAGTAATACGCCCTATAGTAGCCAGGCTTACAAATATTGGGGTCATTCAGAACAGAGATTACCGCACTTTGAGCCCTTGTCAATTACTTGAAATAAGGGAAAAGTTTCGCCAACGGCCTAGGCAAGATCTTTCTCATGTCAACTATGAAGATGTTGAAGGGTATTTTGGCGTTCTCATTACTCTTTATTACATCCATAAGTTGCTCTCAAGTCACGGAATAAGGCCAGCACATGAGATGCTTGAGAGAAAATTGAAGCAAGGATATTTTGCAAAATTTATGAGTAAAAATGAAGTTATTCTGAAAGCAAGGCAGCTAATGCAGCAAAGTTTGTCTCACGGAGCATCTAGTCCAAAATTGTCCAAAATGCTAGATGTATTACTGGAGCATTTCAAAACTAATGATCCGCAAAACTCCAGGGTAATTATCTTCTCCAATTACAGAGAAAGTGTCAGGGATATAATGAATGCACTTGGAGATATTGGGGAATTAGTCAAAGCTACTGAGTTTATTGGTCAAAGTTCAGGGAAAGCAATGAAAGGTCAGTCCCAAAAAGTTCAACAGGCTGTGCTGAAGAAATTTCGGTCTGGCGCCTATAATGTTATTGTTGCTACATCAATTGGTGAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTCATATCTTTTGATGCTAATATTTCACCACTCAGAATGATCCAGCGAATGGGGAGAACAGGAAGAAAGCATGATGGACGAGTCGATATCCTTAGAGTTTCAGTTTTATTTTTGAAGGGCTACTTGCAAAAACAGGCAAAGAGCAAGACTATAAGTAAACACATGCGAAATGGGGGCATAAATAGCTTTACCTTTCATCCTAGTCCAAGGATGATTCCTCATGTCCTTAAACCAGAAGTTAAATGCGTTGAGCTGTCCATTGAGAAATTTATTCCTCGTCCAAAGAATGTGAAAGATGATGAGCTCCACATTTCTCCATCAAAGGACAAACTAACTGTTGCGGAAATTGATTTACTTGAAACATATTTTCACCCTACTGTGGAAAACAATAGTAGAATGTCTCTTATTGCCTTTCCCCACTTTCAGACCTTTCCTTCTAGAGTGCATAAAGTGAAGCATTCCTCTGGAACATTGATGCTTATAGACATGATGCAGCGCTTGCAAGGACTAGTATCATTTCCAGAAGATGACAAAACTTCTTCACTTCAGGAAGATCTGTGTTTGGGACATGGTAAGCCAGTCACCACTACCGAACTTGATGAAGCTAAAAAGGACAATGAATCGTGCTCTAGGCATAAAATGAGAAGGAATTTAGTCTCTGTTAATTGTCTGGAGATGGATTCGTGTCATTTGGGGATTCAAAGCAAAGACTTAGTTGACCTAACTCGACAAGATGGTACTTTCTGTGACTTGGGTAAGAATCAAGAGGAAGCATGTGAGGGTGATGAGACAATTCCTGAAACTCCAATTGCTAAGAGAAGTTTGTCAAATGAAGGAGATAATGATGGTCAAATGGTAAATCTTGTGGAGATTGAGACTTCTTCATTGGCTGCAAATGCATGCATTAATGGCATGAGAGATGAAGAACTTAGTCCACGTTTAACTAATTTGATTAGAAGTGGTGTTGTTCCAGAGTCTCCGGTTGACGAAAGAGGGAAATCAAGATACAATTCTATCATACGTGATTTTGTGTTACCTGTTCATCTCCACAAAGAACAGGATGTTAGTTCTTTAAGCTCTAGTGAAACTAAAGAGGTCATTATTGATAAGGGCACCAACAAGAATGTCTGTACTTCCCCCATTAATGAAACTCAAAGCCCTTTACTTGACCTGAAAAATTGTGCAATTAGAAGAGGACGAGTCTTCCTTTCTCAAATTGAGGAAGGCCATGCACATAACACTGATCCAAGCTTCAGCGAAGAAGCATATCCAGCAGATTGTGGTGAAATGTCCGAAAGCATTAAACCTGCACGCAAATTTAAAAGGTTGCGGAAAGCTGAAGATACTGAAAGAAATATGAATCAGAAAAACAATAAACTTTTTGCTTCAACAGCAAACTTTCTCAAACCATCTTCTGCCTCCAATCCTGCACAATATAAGCATGGCCAAGGTAAAAGGAAATCAACACACAATGTGAGAGACTTCATTGAGGAGGAAGCCGAAGTATCTTCAGATGGCTATGTATCTAATGATGAAGATGATGAGGAAGGCAGTTCATTTGACAGTTTCATAGATGACAGGACCAACCCTACAGCAGCCAGTCAGCCTGAAGCTAGTAGAATGGACATGATGGCAATTTACAGGCGTTCTTTGCTCAGTCAAACACCAAGTAATGGAGGGCTTGATCTTTGTGCCACCTTTACTCCTGACCGTGTGACTATGGCAGCCAGTATTAGTGAAAGTGAGGATTCTACAGGGAAGACAGTGGATCACTTCCACGCAGAGCCAACCAAACAGTCAGCAAATCGGACTTTGGAATCTGTTAGTATCAACCAGATAACCTCAGAAGCAGTGGCTTCAACTTGTTATCCTATGGGAACTGGGACAGAGACAAGAAGTCACAAACGAAGATTGGCATTTTACCATTCTGGACACTTCCCAAATATGAACCTTCAACGAGAATTTGAACTTCAATCAAAGAAAGACGTAGTGCACACTGATGCAACTACAGATGTTCTATGTGATGATCAATTTTATAATGATCTTGATCTTGACGAGTTGGAGGCACAAGCAACATTGCTTCTAAAACAGAAATTAGATTTGTCTAATCAGAAACAAGATACGGTCCCTCAATCTCACACATCCAATCTTGATATTTTTCAGTCTCCATCATTTGACCTTGGGATATGA 3789 0.4072 MASNNPYEIMDDEGFDWEAAAREIDVVCQTTSDVKGKGRVFEKRKQQSTLDKFISIANANAEKETPPPQFQEDDQSPAFIHHIDTEAAKTWIYPVNVPLRDYQFDITQSALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIVGIPQEWTVDMTGQLSPPKRAQFWKTKRVFFVTPQVLEKDIHSGTCLVKYLVCLVIDEAHRAMGNYAYCEAVRELMSVPVQLRILALTATPGSKQQTVQAVIDNLHISRLEYRSETDHDVISYVHSRKIELIQVVAMGPEAVEINNKFMEVIRPIVARLTNIGVIQNRDYRTLSPCQLLEIREKFRQRPRQDLSHVNYEDVEGYFGVLITLYYIHKLLSSHGIRPAHEMLERKLKQGYFAKFMSKNEVILKARQLMQQSLSHGASSPKLSKMLDVLLEHFKTNDPQNSRVIIFSNYRESVRDIMNALGDIGELVKATEFIGQSSGKAMKGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRVDILRVSVLFLKGYLQKQAKSKTISKHMRNGGINSFTFHPSPRMIPHVLKPEVKCVELSIEKFIPRPKNVKDDELHISPSKDKLTVAEIDLLETYFHPTVENNSRMSLIAFPHFQTFPSRVHKVKHSSGTLMLIDMMQRLQGLVSFPEDDKTSSLQEDLCLGHGKPVTTTELDEAKKDNESCSRHKMRRNLVSVNCLEMDSCHLGIQSKDLVDLTRQDGTFCDLGKNQEEACEGDETIPETPIAKRSLSNEGDNDGQMVNLVEIETSSLAANACINGMRDEELSPRLTNLIRSGVVPESPVDERGKSRYNSIIRDFVLPVHLHKEQDVSSLSSSETKEVIIDKGTNKNVCTSPINETQSPLLDLKNCAIRRGRVFLSQIEEGHAHNTDPSFSEEAYPADCGEMSESIKPARKFKRLRKAEDTERNMNQKNNKLFASTANFLKPSSASNPAQYKHGQGKRKSTHNVRDFIEEEAEVSSDGYVSNDEDDEEGSSFDSFIDDRTNPTAASQPEASRMDMMAIYRRSLLSQTPSNGGLDLCATFTPDRVTMAASISESEDSTGKTVDHFHAEPTKQSANRTLESVSINQITSEAVASTCYPMGTGTETRSHKRRLAFYHSGHFPNMNLQREFELQSKKDVVHTDATTDVLCDDQFYNDLDLDELEAQATLLLKQKLDLSNQKQDTVPQSHTSNLDIFQSPSFDLGI 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02184 1262 Gene3D - 95 289 IPR027417 -
Gma08g02184 1262 CDD DEXDc_FANCM 97 278 IPR044749 GO:0005524
Gma08g02184 1262 MobiDBLite consensus disorder prediction 1037 1053 - -
Gma08g02184 1262 Gene3D - 426 593 IPR027417 -
Gma08g02184 1262 Pfam Helicase conserved C-terminal domain 441 556 IPR001650 -
Gma08g02184 1262 Gene3D hef helicase domain 304 425 - -
Gma08g02184 1262 PANTHER FANCONI ANEMIA GROUP M PROTEIN 14 1227 IPR039686 GO:0006281|GO:0043138
Gma08g02184 1262 SMART ultradead3 95 295 IPR014001 -
Gma08g02184 1262 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 14 1227 - -
Gma08g02184 1262 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 433 592 IPR001650 -
Gma08g02184 1262 MobiDBLite consensus disorder prediction 1003 1071 - -
Gma08g02184 1262 Coils Coil 1217 1237 - -
Gma08g02184 1262 CDD SF2_C_FANCM_Hef 431 564 - -
Gma08g02184 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 561 IPR027417 -
Gma08g02184 1262 Pfam Type III restriction enzyme, res subunit 112 256 IPR006935 GO:0003677|GO:0005524|GO:0016787
Gma08g02184 1262 CDD FANCM_ID 307 421 - -
Gma08g02184 1262 SMART helicmild6 463 557 IPR001650 -
Gma08g02184 1262 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 106 274 IPR014001 -
Gma08g02184 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02184 Gma-Chr8 20721877 20748892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02184 406 555 Eukaryotic Initiation Factors Gene Family AT3G13920 26.974 6.05e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02184 K10896 - gmx:100820078 2108.18