Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02175 ATGGTCCGCAACACGGGGGGTTTGAGAAGGGCTTGCAATGCTAGCTTGGAGCCTTTCTCCGTTGAAGAGTTCACGAAGAAGATTGAAGATCTCGCACTCAAGTTTCAGCTATATGAAGAAAATACCAATACGAACGATTTGGATTCAGAGGATTTTCAGGAGATTTCTTTGTCGTTGGTGAATTTCACAGAGGAGTTCGAGCTGCTGGAGGAGATTATTCCGGCAAACATCCAATGGAAAACGAACAACGTAGAGCTTATGTTTTTGCTAAGGATAATCAAGAAGAAGCTACAATGGAAGGAAGGGTTCAAAGAGGCAGGGGAATCCGCGTATTGCACTGTCAAGAAAGGGTTCTCTTCACAATTTCATTATGCAGATGATGGAAGTTTTGTTCTACGAAGATATGCAAGGGATTCTCAAAAGGTTGTAGAACTTGTTAGTAAGGATCCTCTTACTGCAAAAGTCGATAATCTCAAGGATAAAACTTATAACAAAGACAATAATATTATAAAGGCCATGTCTTTATCAACCCTAAGAGATGTTCTTAAAACAAGTCCCCGTTGGAGAGATCATGTCCAAACTTACACTAAGGTCCTTGCCAATTTCCTGTCCAATCCATTAGCTTCAGGAGGAGATAATGATGAAGTAGGATGGCCTTATGTGAGATCTGATCTTGACCCCTCACAAGTAAAGTATTGTCTTCCTTCATCCTTGATTACTCTGAACACTTCTCCTCTTCTACTGATTTCTTCCCAAAAGTCGGGCGAGTGGCGGTTGAATGGTAGTAGTTCTAGTTACAAAAACGGGTAA 810 0.4111 MVRNTGGLRRACNASLEPFSVEEFTKKIEDLALKFQLYEENTNTNDLDSEDFQEISLSLVNFTEEFELLEEIIPANIQWKTNNVELMFLLRIIKKKLQWKEGFKEAGESAYCTVKKGFSSQFHYADDGSFVLRRYARDSQKVVELVSKDPLTAKVDNLKDKTYNKDNNIIKAMSLSTLRDVLKTSPRWRDHVQTYTKVLANFLSNPLASGGDNDEVGWPYVRSDLDPSQVKYCLPSSLITLNTSPLLLISSQKSGEWRLNGSSSSYKNG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02175 269 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 8 120 - -
Gma08g02175 269 Coils Coil 21 41 - -
Gma08g02175 269 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 8 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02175 Gma-Chr8 20495396 20506640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02175 197 231 Inorganic Solute Cotransporters AT4G04850 62.857 8.90e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02175 - - gmx:113002315 279.641